Job Description P0A873 Confidence 100.00% Date Thu Jan 5 11:07:04 GMT 2012 Rank 2 Aligned Residues 235 % Identity 101% Template d1p9pa_ SCOP info alpha/beta knot alpha/beta knot tRNA(m1G37)-methyltransferase TrmD Resolution 2.50

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	W	I	G	I	I	S	L	F	P	E	M	F	R	A	I	T	D	Y	G	V	T	G	R	A	V	K	N	G	L	L	S	I	Q	S	W	S	P	R	D	F	T	H	D	R	H	R	T	V	D	D	R	P	Y	G	G	G	P	G	M	L	M	M	V	Q	P	L	R	D	A	I	H	A	A	K	A	A	A	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	W	I	G	I	I	S	L	F	P	E	M	F	R	A	I	T	D	Y	G	V	T	G	R	A	V	K	N	G	L	L	S	I	Q	S	W	S	P	R	D	F	T	H	D	R	H	R	T	V	D	D	R	P	Y	G	G	G	P	G	M	L	M	M	V	Q	P	L	R	D	A	I	H	A	A	K	A	A	A	G	E
Template Known Secondary structure									S		G	G	G	G					S	S									T	T	S								G	G	G	G			S	T	T								T	T			S	S																					T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	K	V	I	Y	L	S	P	Q	G	R	K	L	D	Q	A	G	V	S	E	L	A	T	N	Q	K	L	I	L	V	C	G	R	Y	E	G	I	D	E	R	V	I	Q	T	E	I	D	E	E	W	S	I	G	D	Y	V	L	S	G	G	E	L	P	A	M	T	L	I	D	S	V	S	R	F	I	P	G	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	K	V	I	Y	L	S	P	Q	G	R	K	L	D	Q	A	G	V	S	E	L	A	T	N	Q	K	L	I	L	V	C	G	R	Y	E	G	I	D	E	R	V	I	Q	T	E	I	D	E	E	W	S	I	G	D	Y	V	L	S	G	G	E	L	P	A	M	T	L	I	D	S	V	S	R	F	I	P	G	V	L
Template Known Secondary structure		T																							T		S									T	T												S					S	S	S	S			S		S													T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	E	A	S	A	T	E	D	S	F	A	E	G	L	L	D	C	P	H	Y	T	R	P	E	V	L	E	G	M	E	V	P	P	V	L	L	S	G	N	H	A	E	I	R	R	W	R	L	K	Q	S	L	G	R	T	W	L	R	R	P	E	L	L	E	N	L	A	L	T	E	E	Q	A	R	L	L	A	E	F
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	.	.	.	.	.	.	.	.	.	.	.	G	L	L	D	C	P	H	Y	T	R	P	E	V	L	E	G	M	E	V	P	P	V	L	L	S	G	N	H	A	E	I	R	R	W	R	L	K	Q	S	L	G	R	T	W	L	R	R	P	E	L	L	E	N	L	A	L	T	E	E	Q	A	R	L	L	A	E	F
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.		S								S		S			T	T									S																												T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	E	H	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	E	H	A	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions