Return to main results Retrieve Phyre Job Id

Job DescriptionP21365
Confidence8.65%DateThu Jan 5 11:38:11 GMT 2012
Rank9Aligned Residues29
% Identity17%Templated1rh5c_
SCOP infoSingle transmembrane helix Sec-beta subunit Sec-beta subunit
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........
Predicted Secondary structure 
Query SS confidence 




























Query Sequence  DTGNFFRNQFMTILLVSLLCAFITVVLGH
Query Conservation 


 
 
 
   



 

 


  

  
Alig confidence 




























Template Conservation 




























Template Sequence  ETFSKIRVKPEHVIGVTVAFVIIEAILTY
Template Known Secondary structure 



S



Template Predicted Secondary structure 







Template SS confidence 




























   21........30.........40.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions