 |
Job Description | P21365 | Confidence | 4.85% | Date | Thu Jan 5 11:38:11 GMT 2012 |
Rank | 65 | Aligned Residues | 50 |
% Identity | 14% | Template | c3kcvG_ |
PDB info |
PDB header:transport protein | Chain: G: PDB Molecule:probable formate transporter 1; |
PDBTitle: structure of formate channel
|
Resolution | 3.20 Å |
|
  |   |
133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | F | L | T | T | L | L | V | Q | I | G | I | M | L | V | V | V | P | G | I | I | M | A | I | L | L | A | L | A | P | V | M | L | V | Q | D | K | M | G | V | F | A | S | M | R | S | S | M | R | L | T |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|
|
|   |
|   |
| . |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|   |
Template Sequence |   |
K | L | V | G | G | I | C | F | S | L | G | L | I | L | C | V | V | C | G | A | D | L | F | T | S | T | V | L | . |
I | V | V | A | K | A | S | G | R | I | T | W | G | Q | L | A | K | N | W | L | N | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T | T | T |  |  | . |  |  |  |  |  | S | T | T |
| S |
|  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|