Job Description P0AAJ3 Confidence 97.24% Date Thu Jan 5 11:13:04 GMT 2012 Rank 59 Aligned Residues 106 % Identity 17% Template c2h89B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		M	E	T	Q	D	I	I	K	R	S	A	T	N	S	I	T	P	P	S	Q	V	R	D	Y	K	A	E	V	A	K	L	I	D	V	S	T	C	I	G	C	K	A	C	Q	V	A	C	S	E	.	W	N	D	I	R	D	E	V	G	H	C	V	G	V	Y	D	N	P	A	D	L	S	A	K	S	W	T	V	M	R
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		Y	K	S	I	E	P	Y	L	K	K	K	D	E	S	K	Q	G	K	E	Q	Y	L	Q	S	I	E	D	R	Q	K	L	D	G	L	Y	E	C	I	L	C	A	C	C	S	T	S	C	P	S	Y	W	W	N	G	D	K	Y	L	G	P	A	V	L	M	Q	A	Y	R	W	M	I	D	S	R	D	D	Y	T	E	E
Template Known Secondary structure				T	T			S				S			T	T	T	T	S	S											T	T	T	T	T	T	T						T	T	G	G	G								T	T	T															S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	E	T	E	Q	N	G	K	L	E	W	L	I	R	K	D	G	C	M	H	C	E	D	P	G	C	L	K	A	C	P	S	A
Query Conservation
Alig confidence															.	.	.	.	.						.	.
Template Conservation															.	.	.	.	.						.	.
Template Sequence		R	L	A	Q	L	Q	D	P	F	S	L	Y	R	.	.	.	.	.	C	H	T	I	M	.	.	N	C	T	R	T	C	P	K	G
Template Known Secondary structure					T	T		S	T	T	T	T	T	T	.	.	.	.	.						.	.							T	T
Template Predicted Secondary structure															.	.	.	.	.						.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.			220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions