 |
Job Description | P64578 | Confidence | 6.14% | Date | Thu Jan 5 12:09:36 GMT 2012 |
Rank | 75 | Aligned Residues | 50 |
% Identity | 12% | Template | c2zvkC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:proliferating cell nuclear antigen; |
PDBTitle: crystal structure of pcna in complex with dna polymerase eta fragment
|
Resolution | 2.70 Å |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | Y | F | K | K | P | E | S | L | K | A | V | F | P | S | L | D | N | F | K | Y | L | D | K | H | Y | V | F | N | V | G | G | N | E | L | R | V | V | A | M | V | F | F | E | S | Q | K | C | Y | I | R | E |
Query Conservation |   |
  |
|   |
|   |   |   |   |
|
|
|   |   |
|   |
|
|
|   |   |
|   |   |   |   |
|   |
|
|
|
|   |
|
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
| . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |
Template Sequence |   |
E | A | R | L | V | Q | G | S | I | L | K | K | V | L | E | A | L | K | D | L | . |
. |
. |
I | N | E | A | C | W | D | I | S | S | S | G | V | N | L | Q | S | M | D | S | S | H | V | S | L | V | Q | L | T | L |
Template Known Secondary structure |   |
 |  |  |  | S |
| T |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . |
| S |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|