Job Description P31068 Confidence 98.46% Date Thu Jan 5 11:47:03 GMT 2012 Rank 1 Aligned Residues 169 % Identity 14% Template c3k5bE_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:v-type atp synthase subunit e; PDBTitle: crystal structure of the peripheral stalk of thermus thermophilus h+-2 atpase/synthase Resolution 3.10 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	Q	L	A	Q	L	Q	M	Q	A	H	E	Q	G	Y	Q	A	G	I	A	E	G	R	Q	Q	G	H	K	Q	G	Y	Q	E	G	L	A	Q	G	L	E	Q	G	L	A	E	A	K	S	Q	Q	A	P	I	H	A	R	M	Q	Q	L	V	S	E	F	Q	T	T	L	D	A	L	D	S	V	I	A	S	R	L
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		A	I	L	S	Q	E	V	E	A	E	I	Q	A	L	L	Q	E	A	.	.	.	.	.	.	E	A	K	A	E	A	V	K	R	E	A	E	E	K	A	K	A	L	L	Q	A	R	E	R	A	L	E	A	Q	Y	R	A	A	L	R	R	A	E	S	A	G	E	L	L	V	A	T	A	R	T	Q	A	R	G	E	V
Template Known Secondary structure																			T	.	.	.	.	.	.	T	S	S	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		M	Q	M	A	L	E	A	A	R	Q	V	I	G	Q	T	P	T	.	.	V	D	N	S	A	L	I	K	Q	I	Q	Q	L	L	Q	Q	E	P	L	F	S	G	K	P	Q	L	R	V	H	P	D	D	L	Q	R	V	D	D	M	L	G	A	T	L	S	L	H	G	W	R	L	R	G	D	P	T	L	H	P	G	G
Query Conservation																			.	.
Alig confidence																			.	.																		.	.						.															.	.	.	.	.	.														.
Template Conservation																																						.	.						.															.	.	.	.	.	.														.
Template Sequence		L	E	E	V	R	R	R	V	R	E	A	L	E	A	L	P	Q	K	P	E	W	P	E	V	V	R	K	L	A	L	E	A	L	E	A	L	.	.	P	G	A	K	A	.	L	V	A	N	P	E	D	L	P	H	L	E	A	X	.	.	.	.	.	.	A	R	E	R	G	V	E	L	E	P	A	L	R	.	L	G
Template Known Secondary structure															T	S	T	T	S	T	T															S	S	.	.	S		S			.					T	T	S	S	T	T			T	T	.	.	.	.	.	.	T	T	T	T										.	S
Template Predicted Secondary structure																																						.	.						.															.	.	.	.	.	.														.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.	140	.	.	.	.	.	.	.		.	.
		199	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		C	K	V	S	A	D	E	G	.	.	D	L	D	A	S	V	A	T	R	W	Q	E	L	C	R	L	A	A	P
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		V	R	A	V	G	A	E	G	K	T	Q	V	E	N	S	L	L	A	R	X	D	R	A	W	D	A	X	S	S
Template Known Secondary structure							S	S	S														T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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