Job Description P76182 Confidence 23.53% Date Thu Jan 5 12:20:12 GMT 2012 Rank 2 Aligned Residues 85 % Identity 9% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		M	V	F	R	I	A	S	S	P	Y	T	H	N	Q	R	Q	T	S	R	I	M	L	L	V	L	L	A	A	V	P	G	I	A	A	Q	L	W	F	F	G	.	W	G	T	L	V	Q	I	L	L	A	S	V	S	A	L	L	A	E	A	L	V	L	K	L	R	K	Q	S	V	A	A	T	L	K	D	N	S	A	L
Query Conservation																																										.
Alig confidence																																										.																														.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		M	A	Y	L	F	V	R	L	P	S	S	F	L	P	D	S	G	N	Q	A	P	S	L	Y	A	I	S	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	.	.	.	.	D	V	Y	F	Q	V
Template Known Secondary structure								S	S		B		S	S					T	T																			T	T		S	S	S					G	G	G																T	T			B	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.					.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	G	L	L	L	A	V	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	L	T	T	I	G	L	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		930	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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