Job Description P76182 Confidence 1.86% Date Thu Jan 5 12:20:12 GMT 2012 Rank 96 Aligned Residues 85 % Identity 13% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		M	V	F	R	I	A	S	S	P	Y	T	H	N	Q	R	Q	T	S	R	I	M	L	L	V	L	L	A	A	V	P	G	I	A	A	Q	L	W	F	F	G	.	W	G	T	L	V	Q	I	L	L	A	S	V	S	A	L	L	A	E	A	L	V	L	K	L	R	K	Q	S	V	A	A	T	L	K	D	N	S	A	L
Query Conservation																																										.
Alig confidence																																										.																														.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		L	K	L	P	V	A	Q	Y	P	T	P	F	V	K	I	S	I	H	E	V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	.	.	.	.	N	T	L	T	M	F
Template Known Secondary structure		T	T	S				S	S																													T	T				T	T	T	T	T																			T	T	T			S	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.
		80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	G	L	L	L	A	V	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	M	V	L	A	I	G	L	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions