Return to main results Retrieve Phyre Job Id

Job DescriptionP76182
Confidence2.13%DateThu Jan 5 12:20:12 GMT 2012
Rank81Aligned Residues63
% Identity16%Templatec3c1iA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:ammonia channel; PDBTitle: substrate binding, deprotonation and selectivity at the2 periplasmic entrance of the e. coli ammonia channel amtb
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90.........100.....
Predicted Secondary structure 













Query SS confidence 































































Query Sequence  GTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFA
Query Conservation   

  
  

  

  
 
   
  
 
     
 

 







 


  
 
    
  

Alig confidence 


























.



































Template Conservation   
  

 

 
 
             
.       

 








    
 
  
 


 

Template Sequence  LAFVNTVVATAAAILGWIFGEWALRGK. PSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVA
Template Known Secondary structure  SS.

TTTTTTS
Template Predicted Secondary structure 


.









Template SS confidence 































































   229230.........240.........250..... ....260.........270.........280.........290.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions