Job Description P30744 Confidence 5.19% Date Thu Jan 5 11:46:19 GMT 2012 Rank 90 Aligned Residues 127 % Identity 18% Template c3ugsB_ PDB info PDB header:transferase Chain: B: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of a probable undecaprenyl diphosphate synthase2 (upps) from campylobacter jejuni Resolution 2.46 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		Y	S	S	A	A	D	L	Q	K	H	C	Q	E	T	G	L	S	L	.	S	G	L	M	M	K	N	E	L	A	L	H	S	K	E	E	L	E	Q	H	L	A	N	V	W	E	V	M	R	G	G	I	E	R	G	I	S	T	E	G	V	L	P	G	K	L	R	V	P	R	R	A	A	A	L	R	R	M	L	V	S
Query Conservation																				.
Alig confidence																				.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	T	M	Q	K	L	M	E	V	C	M	E	E	N	I	S	N	L	S	L	F	A	F	S	T	E	N	W	K	R	P	K	D	E	I	D	F	I	F	E	L	L	D	R	C	L	D	E	A	L	E	K	F	E	K	N	N	V	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R
Template Known Secondary structure															T	T											S	G	G	G	G	S																							S	T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																			.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	K	T	T	T	D	P	M	A	V	V	D	W	I	N	M	F	A	L	A	V	N	E	E	N	A	A	G	G	R	V	V	T	A	P	T	N	G	A	C	G	I	I	P	A	V	L	A	Y	Y	D	K	F	I	R	E	V	N	A	N	S	L	A	R	Y	L
Query Conservation
Alig confidence																																																	.
Template Conservation																																																	.
Template Sequence		A	I	G	D	L	S	R	L	E	D	K	V	R	E	K	I	T	L	V	E	E	K	T	K	H	C	D	A	L	C	V	N	L	A	I	S	Y	G	A	R	D	E	I	I	R	A	A	.	K	R	V	I	E	K	K	L	E	L	N	E	E	N	L	T	Q	N	L
Template Known Secondary structure				S		G	G	G	S																T	T			S																				.						T	T				S							T	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions