Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMT9
Confidence2.64%DateThu Jan 5 12:38:15 GMT 2012
Rank60Aligned Residues9
% Identity33%Templatec1zc1A_
PDB info PDB header:protein turnoverChain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   137..140.....
Predicted Secondary structure 
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Query Sequence  GFIFIPYWV
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Template Conservation 
 
 

 

Template Sequence  GRVYLPQWM
Template Known Secondary structure 

Template Predicted Secondary structure 


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   92.......100
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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