Job Description P16256 Confidence 5.44% Date Thu Jan 5 11:35:02 GMT 2012 Rank 14 Aligned Residues 102 % Identity 16% Template c3rlbA_ PDB info PDB header:thiamine-binding protein Chain: A: PDB Molecule:thit; PDBTitle: crystal structure at 2.0 a of the s-component for thiamin from an ecf-2 type abc transporter Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		R	M	S	A	V	I	T	L	V	L	G	A	L	L	L	L	A	A	W	K	P	P	E	M	I	I	W	L	N	L	L	A	F	G	G	L	E	A	V	F	L	W	P	L	V	L	G	L	Y	W	E	R	A	N	A	K	G	A	L	S	A	M	I	V	G	G	V	L	Y	A	V	L	A	T	L	N	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																																						.																								.	.	.	.
Template Conservation																																																						.
Template Sequence		R	R	G	L	T	A	G	L	V	G	G	L	I	W	G	I	L	S	M	I	T	G	H	A	Y	I	L	S	L	S	Q	A	F	L	E	Y	L	V	A	P	V	S	L	G	I	A	G	L	F	R	Q	K	.	T	A	P	L	K	L	A	P	V	L	L	G	T	F	V	A	V	L	L	K	Y	F	F	H	F	I	A
Template Known Secondary structure																						T	T		S			S	S									T						G	G	G	G	G	G	G				.	S	S	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
									444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	I	Q	Y	L	G	F	H	P	I	V	P	S	L	L	L	S	L	L	A	F	L	V	G	N	R	F	G
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	I	F	W	S	Q	Y	A	W	K	G	W	G	A	V	A	Y	S	L	A	V	N	G	I	S	G	I	L	T	A	I	A	A
Template Known Secondary structure							G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions