Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACX9
Confidence8.05%DateThu Jan 5 11:19:22 GMT 2012
Rank16Aligned Residues25
% Identity16%Templatec2xzmW_
PDB info PDB header:ribosomeChain: W: PDB Molecule:40s ribosomal protein s4; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
Resolution3.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60...
Predicted Secondary structure 








Query SS confidence 
























Query Sequence  KLIIDHDGQEYLLRKTQAGKLLLTK
Query Conservation 

 
 
 
  
 

 
  






Alig confidence 
























Template Conservation 



    
 



 
 

 
 
  
Template Sequence  VVRIEKTDQSFRILYDTKGRFVLKS
Template Known Secondary structure  GGGT
SSS
Template Predicted Secondary structure 









Template SS confidence 
























   91........100.........110.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions