Job Description P32704 Confidence 99.93% Date Thu Jan 5 11:50:25 GMT 2012 Rank 8 Aligned Residues 179 % Identity 15% Template d2bm5a1 SCOP info Single-stranded right-handed beta-helix Pentapeptide repeat-like Pentapeptide repeats Resolution 2.0

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	K	D	E	D	L	S	N	S	N	F	A	G	C	R	L	Q	N	A	I	F	Q	D	C	N	M	Y	K	T	N	F	N	F	A	I	M	E	K	I	L	F	D	N	C	I	L	D	D	S	N	F	A	Q	I	K	M	T	D	G	T	L	N	S	C	S	A	M	H	V	Q	F	Y	N	A	T	M	N	R	A
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		Q	W	V	D	C	E	F	T	G	R	D	F	R	D	E	D	L	S	R	L	H	T	E	R	A	M	F	S	E	C	D	F	S	G	V	N	L	A	E	S	Q	H	R	G	S	A	F	R	N	C	T	F	E	R	T	T	L	W	H	S	T	F	A	Q	C	S	M	L	G	S	V	F	V	A	C	.	.	.	.	.
Template Known Secondary structure					S					S		B		T	T		B		T	T					S					S		B		T	T		B		T	T					S					S					S		B		T	T									T	T					S		.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	K	N	T	F	L	D	Y	S	N	F	Y	M	A	Y	M	A	E	V	N	L	Y	K	V	I	A	P	Y	I	N	L	F	R	A	D	L	S	F	S	K	L	D	L	I	N	F	E	H	A	D	L	S	R	V	N	L	N	K	A	T	L	Q	N	I	N	L	I	D	S	K	L	F	F	T	R	L	T	N	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	R	P	L	T	L	D	D	V	D	F	T	L	A	V	L	G	G	N	D	L	R	G	L	N	L	T	G	C	R	L	R	E	T	S	L	V	D	T	D	L	R	K	C	V	L	R	G	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B			S									T	T		B		T	T		B		T	T		B		T	T		B		T	T		B		T	T		B		T	T		B		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		F	L	E	M	V	I	C	T	D	S	N	M	A	N	V	N	F	N	N	A	N	L	S	N	C	H	F	N	C	S	V	L	T	K	A	W	M	F	N	I	R	.	L	Y	R	V	N	F	D	E	A	S	V	Q	G
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		D	L	S	G	A	R	T	T	G	A	R	L	D	D	A	D	L	R	G	A	T	V	D	P	V	L	W	R	T	A	S	L	V	G	A	R	V	D	V	D	Q	A	V	A	F	A	A	A	H	G	L	C	L	A	G
Template Known Secondary structure		B		T	T		B		T	T		B		T	T		B		T	T		B									S	B		T	T		B													T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions