Return to main results Retrieve Phyre Job Id

Job DescriptionP32704
Confidence99.96%DateThu Jan 5 11:50:25 GMT 2012
Rank6Aligned Residues176
% Identity14%Templatec3nb2B_
PDB info PDB header:ligaseChain: B: PDB Molecule:secreted effector protein; PDBTitle: crystal structure of e. coli o157:h7 effector protein nlel
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150........ .160.........170.........180.........190.........200.........210.........220..
Predicted Secondary structure 










..





























































Query SS confidence 













. .































































Query Sequence  GGYDFSHLSLKGIV. . IKDEDLSNSNFAGCRLQNAIFQDCNMYKTNFNFAIMEKILFDNCILDDSNFAQIKMTDGTLNSC
Query Conservation 

 


  

 
  ..
   









 
  
 
  


  



 
 
  
 
  
 
  



 
 
  
 
  
Alig confidence 













..































































Template Conservation 
 
 

 
 
 
 
  

     
  
  








 


 




 


 

 
  



 



 
 
  


 

Template Sequence  GRACLSKAELTADLIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNS
Template Known Secondary structure 

TTS
T

S


B
TT
B
TT
B

S
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
Template Predicted Secondary structure 









































Template SS confidence 















































































   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   223......230.........240.........250.........260.........270.........280.........290.........300..
Predicted Secondary structure 






















































Query SS confidence 















































































Query Sequence  SAMHVQFYNATMNRANIKNTFLDYSNFYMAYMAEVNLYKVIAPYINLFRADLSFSKLDLINFEHADLSRVNLNKATLQNI
Query Conservation   
  
 
  
 
  
 
  
 
  
 
  
 
  
 
  
 
  
 
  
 

 
 
  
 
  



 
 

 
 
  
Alig confidence 
















...................................................











Template Conservation 

  


 






 
...................................................

 

 





Template Sequence  ILNECNFCYANLSNCII. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RALFENSNFSNS
Template Known Secondary structure 
TT
B
TT
B
TT
...................................................
TT
B
TT
Template Predicted Secondary structure 












...................................................









Template SS confidence 















































































   252.......260........ .270.........280
 
   303......310...... ...320......... 330.........340.........350.. .......360.........370.
Predicted Secondary structure 













..












.






















.














Query SS confidence 













. .












.






















.


















Query Sequence  NLIDSKLFFTRLTN. . TFLEMVICTDSNM. ANVNFNNANLSNCHFNCSVLTKA. WMFNIRLYRVNFDEASVQG
Query Conservation 

  
 
 

 

 ..
 
  
 

 


.
 



 
 

 


  
 
  
. 
  
 
  


  


 
Alig confidence 













..












.






















.


















Template Conservation 

  


 

 
    
 

 








 






 
 


 
    





 
  

 


 
  

 
Template Sequence  NLKNASFKGSSYIQYPPILNEADLTGAIIIPGMVLSGAILGDVKELFSEKSNTINLGGCYIDLSDIQENILSV
Template Known Secondary structure  B
TT
B
TT
B
SSS

B
TT
B
TT

TT


TT
B



SSSS
SSSSTT
SSSTT
GGGG
Template Predicted Secondary structure 


























































Template SS confidence 








































































   281........290.........300.........310.........320.........330.........340.........350...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions