Return to main results Retrieve Phyre Job Id

Job DescriptionP32704
Confidence99.96%DateThu Jan 5 11:50:25 GMT 2012
Rank5Aligned Residues182
% Identity16%Templatec2xt4A_
PDB info PDB header:cell cycleChain: A: PDB Molecule:mcbg-like protein; PDBTitle: structure of the pentapeptide repeat protein albg, a2 resistance factor for the topoisomerase poison albicidin.
Resolution2.394 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 











































































Query SS confidence 















































































Query Sequence  SLKGIVIKDEDLSNSNFAGCRLQNAIFQDCNMYKTNFNFAIMEKILFDNCILDDSNFAQIKMTDGTLNSCSAMHVQFYNA
Query Conservation 

 
  
   









 
  
 
  


  



 
 
  
 
  
 
  



 
 
  
 
  
 
  
 
  
Alig confidence 















































































Template Conservation 

 
  
    
    
       
 
  
 
                                                
Template Sequence  DYCGESFVSEDRSGQSLESIRFEDCTFRQCNFTEAELNRCKFRECEFVDCNLSLISIPQTSFMEVRFVDCKMLGVNWTSA
Template Known Secondary structure  S
S
B
TT
S
S
S
B
TT
T
S
B
TT
B
TT
S
B
TT
B
TT
Template Predicted Secondary structure 







































































Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
Predicted Secondary structure 
























































Query SS confidence 















































































Query Sequence  TMNRANIKNTFLDYSNFYMAYMAEVNLYKVIAPYINLFRADLSFSKLDLINFEHADLSRVNLNKATLQNINLIDSKLFFT
Query Conservation   
  
 
  
 
  
 
  
 
  
 
  
 
  
 
  
 

 
 
  
 
  



 
 

 
 
  


  
 
 

Alig confidence 









.........................












































Template Conservation            .........................                                         
   
Template Sequence  QAGALSFERC. . . . . . . . . . . . . . . . . . . . . . . . . ILNDSLFYGLYLAGVKMVECRIHDANFTEADCEDADFTQSDLKGS
Template Known Secondary structure  S
.........................B
TT
B
TT
B
TT
S
B
TT
B
TT
B
TT
B
TT
B
TT
Template Predicted Secondary structure 









.........................




























Template SS confidence 















































































   90......... 100.........110.........120.........130.........140....
 
   313......320.........330.........340.........350. ........
Predicted Secondary structure 






































.





Query SS confidence 






































.







Query Sequence  RLTNTFLEMVICTDSNMANVNFNNANLSNCHFNCSVLTK. AWMFNIRL
Query Conservation   

 
 
  
 

 



 



 
 

 


  
 
  .
 
  
 
Alig confidence 






































.







Template Conservation   
    
    
  
 
    
  
 
  
 

 
 
  
    
  
Template Sequence  TFHNTKLTGASFIDAVNYHIDIFHNDIKRARFSLPEAASLLNSLDIEL
Template Known Secondary structure  BBSS
B
TT
B
TT
BS

B
TTSSB
TT
B

TTGGGGGGGSS



Template Predicted Secondary structure 

























Template SS confidence 















































   151........160.........170.........180.........190........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions