Job Description P32704 Confidence 99.93% Date Thu Jan 5 11:50:25 GMT 2012 Rank 9 Aligned Residues 187 % Identity 18% Template c2w7zB_ PDB info PDB header:inhibitor Chain: B: PDB Molecule:pentapeptide repeat family protein; PDBTitle: structure of the pentapeptide repeat protein efsqnr, a dna2 gyrase inhibitor. free amines modified by cyclic3 pentylation with glutaraldehyde. Resolution 1.60 Å

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		164	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	S	N	S	N	F	A	.	G	C	R	L	Q	N	A	I	F	Q	D	C	N	M	Y	K	T	N	F	N	F	A	I	M	E	K	I	L	F	D	N	C	I	L	D	D	S	N	F	A	Q	I	K	M	T	D	G	T	L	N	S	C	S	A	M	H	V	Q	F	Y	N	A	T	M	N	R	A	N	I	K	N	T
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		L	T	N	C	Q	L	E	D	E	A	I	L	E	N	H	L	Y	Q	Q	I	D	L	P	N	Q	E	V	R	N	L	V	F	R	D	A	V	F	D	H	L	S	L	A	N	G	Q	F	A	S	F	D	C	S	N	V	R	F	E	A	C	D	F	S	N	V	E	W	L	S	G	S	F	H	R	V	T	F	L	R	C
Template Known Secondary structure			S						T	T					S	S									S		B		S	S														T	T		B		T	T										S		B		T	T		B		T	T										S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	D	Y	S	N	F	Y	M	A	Y	M	A	E	V	N	L	Y	K	V	I	A	P	Y	I	N	L	F	R	A	D	L	S	F	S	K	L	D	L	I	N	F	E	H	A	D	L	S	R	V	N	L	N	K	A	T	L	Q	N	I	N	L	I	D	S	K	L	F	F	T	R	L	T	N	T	F	L	E	M	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.																													.	.																			.
Template Conservation																								.	.	.	.	.	.	.																													.	.																			.
Template Sequence		N	L	T	G	T	N	F	A	D	S	Y	L	D	C	L	F	E	D	C	A	D	Y	.	.	.	.	.	.	.	A	S	F	R	F	A	N	F	N	L	V	H	F	N	Q	T	R	L	V	E	S	E	F	F	E	V	T	W	.	.	L	L	L	E	A	C	D	L	T	E	S	N	W	L	N	T	S	L	.	G	L
Template Known Secondary structure		B		T	T		B		T	T		B										T	T	.	.	.	.	.	.	.		B		T	T		B		S	S					S		B		T	T		B		T	T		B		.	.					S		B		T	T				T	T				.
Template Predicted Secondary structure																								.	.	.	.	.	.	.																													.	.																			.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	T	D	S	N	M	A	N	V	N	F	N	N	A	N	L	S	N	C	H	F	N	C	S	V	L	T	K	A	W	M	F	N	I	R	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	S	Q	N	T	F	E	R	L	T	F	S	P	N	Y	L	S	G	L	V	T	P	E	Q	A	I	Y	L	A	S	A	L	G	L	V	I	T
Template Known Secondary structure				T	T	S	B		S						G	G	G		T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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