Job Description P52143 Confidence 96.16% Date Wed Jan 25 15:20:58 GMT 2012 Rank 41 Aligned Residues 136 % Identity 15% Template d2pora_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.80

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		1383	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.																		.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	I	E	T	G	M	R	F	T	D	G	N	W	N	L	T	P	Y	A	S	L	T	G	F	T	A	D	N	P	E	Y	H	L	S	N	G	M	K	S	K	S	V	D	T	R	S	I	Y	R	E	L	G	A	T	L	S	Y	N	M	R	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		E	M	A	V	A	A	A	Y	T	F	G	N	Y	.	.	.	.	T	V	G	L	G	Y	E	K	I	D	S	P	D	T	A	L	M	A	D	M	E	Q	L	E	L	A	A	I	A	K	F	G	A	T	N	V	K	A	Y	Y	A	D	G	E	L	D	R	D	F	A	R	A	V	F	D	L	T	P	V	A	A	A	A
Template Known Secondary structure												T	T		.	.	.	.												S		T	T	T	S															T	T																					T	T					S	S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		1446	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	E	V	E	P	W	L	K	A	A	V	R	K	E	F	V	D	D	N	R	V	K	V	N	S	D	G	N	F	V	N	Y	L	S	G	R	R	G	I	Y	Q	A	G	I	K	A	S	F	S	S	T	L	S	G	H	L	G	V	G	Y	S	H	S	A	G	V	E	S	P	W	N	A	V	A	G	V	N	W	S
Query Conservation
Alig confidence																		.											.																													.	.
Template Conservation																		.											.																													.	.
Template Sequence		T	A	V	D	H	K	A	Y	G	L	S	V	D	S	T	F	.	G	A	T	T	V	G	G	Y	V	Q	.	V	L	D	I	D	T	I	D	D	V	T	Y	Y	G	L	G	A	S	Y	D	L	G	G	G	A	S	I	V	.	.	G	G	I	A	D	N	D	L	P	N	S	D	M	V	A	D	L	G	V	K	F	K
Template Known Secondary structure																		.	T	T									.					T	T	T																T	T					.	.								S	S	S
Template Predicted Secondary structure																		.											.																													.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		1526
Predicted Secondary structure
Query SS confidence
Query Sequence		F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		301

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions