Job Description P52143 Confidence 99.91% Date Wed Jan 25 15:20:58 GMT 2012 Rank 7 Aligned Residues 521 % Identity 16% Template d1daba_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Virulence factor P.69 pertactin Resolution 2.50

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		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	N	I	E	S	G	E	Q	I	V	D	G	G	S	T	E	K	T	H	I	N	G	G	T	Q	T	V	Q	N	Y	G	K	A	I	N	T	D	I	V	S	G	L	Q	Q	I	M	A	N	G	T	A	E	G	S	I	I	N	G	G	S	Q	V	V	N	E	G	G	L	A	E	N	S	V	L	N	D	G	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	I	Q	G	S	D	P	G	G	V	R	T	A	S	G	T	T	I	K	V	S	G	R	Q	A	Q	G	I	L	L	E	N	P	A	A	E	L	Q	F	R	N	G	S	V	T	S	S	G	Q	L	S	D	D	G	I	R	R	F	L	G	T	V	T	V	K	A	G	K	L	V	A	D	H	A	T	L	A	N	V	G
Template Known Secondary structure					T	T	S									S							S	T	T			S														S							S			B		S	S	S	S		B			S												S							S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		727	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	V	R	E	K	G	S	A	T	G	I	Q	Q	S	S	Q	G	A	L	V	A	T	T	R	A	T	R	V	T	G	T	R	A	D	G	V	A	F	S	I	E	Q	G	A	A	N	N	I	L	L	A	N	G	G	V	L	T	V	E	S	D	T	S	S	D	K	T	Q	V	N	M	G	G	R	E	I	V	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	W	D	D	D	G	I	A	L	Y	V	A	G	E	Q	A	Q	A	S	I	A	D	S	T	L	Q	G	A	G	G	V	Q	I	E	R	G	A	N	V	T	V	Q	R	S	A	I	V	D	G	G	L	H	I	G	A	L	Q	S	L	Q	P	E	D	L	P	P	S	R	V	V	L	R	D	T	N	V	T	A	V
Template Known Secondary structure			T	T	T	S									S	T	T							S					S	T	T						T	T							S					S	B							S	S			S				S									S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		807	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	T	A	T	G	T	T	L	T	G	G	E	Q	I	V	E	G	V	A	N	E	T	T	I	N	D	G	G	I	Q	T	V	S	A	N	G	E	A	I	K	T	K	I	N	E	G	G	T	L	T	V	N	D	N	G	K	A	T	D	I	V	Q	N	S	G	A	A	L	Q	T	S	T	A	N	G	I	E	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	S	G	A	P	A	A	V	S	V	L	G	A	S	E	L	T	L	D	G	G	H	I	T	G	G	R	A	A	G	V	A	A	M	Q	G	A	V	V	H	L	Q	R	A	T	I	R	R	G	D	A	L	A	G	G	A	V	P	G	G	A	V	P	G	G	A	V	P	G	G	F	G	P	G	G	F	G	P	V
Template Known Secondary structure		T	T	S			S							S	S														S	S							S	S												S						S	S	S	S	S		S	S			S					S	S	S			S	S				S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		887	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	H	Q	Y	G	T	F	S	I	S	G	N	L	A	T	N	M	L	L	E	N	G	G	N	L	L	V	L	A	G	T	E	A	R	D	S	T	V	G	K	G	G	A	M	Q	N	L	G	Q	D	S	A	T	K	V	N	S	G	G	Q	Y	T	L	G	R	S	K	D	E	F	Q	A	L	A	R	A	E	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	G	W	Y	G	V	D	V	S	G	S	S	V	E	L	A	Q	S	I	V	E	A	P	E	L	G	A	A	I	R	V	G	R	G	A	R	V	T	V	P	G	G	S	L	S	A	P	H	G	N	V	I	E	T	G	G	A	R	R	F	A	P	Q	A	A	P	L	S	I	T	L	Q	A	G	A	H	A	Q	G
Template Known Secondary structure		S		S								S	S						S							S	S								T	T							S	S																S	S			S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		967	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	A	G	G	T	A	I	V	Y	A	G	T	L	A	D	A	S	V	S	G	A	T	G	S	L	S	L	M	T	P	R	D	N	V	T	P	V	K	L	E	G	A	V	R	I	T	D	S	A	T	L	T	L	G	N	G	V	D	T	T	L	A	D	L	T	A	A	S	R	G	S	V	W	L	N	S	N	N	S
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	L	L	Y	R	V	L	P	E	P	V	K	L	T	L	T	G	G	A	D	A	Q	G	D	I	V	A	T	E	L	P	S	I	P	G	T	S	I	G	P	L	D	V	A	L	A	S	Q	A	R	W	T	G	A	T	R	A	V	D	S	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	N
Template Known Secondary structure									S	S									T	T											S		S	S	S		G	G	G	S									T	T							B	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400															.	.	.
		1047	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	G	T	S	N	C	E	Y	R	V	N	S	L	L	L	N	D	G	D	V	Y	L	S	A	Q	T	A	A	P	A	T	T	N	G	I	Y	N	T	L	T	T	N	E	L	S	G	S	G	N	F	Y	L	H	T	N	V	A	G	S	R	G	D	Q	L	V	V	N	N	N	A	T	G	N	F	K	I	F	V	Q
Query Conservation
Alig confidence																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		A	T	W	V	M	T	D	N	S	N	V	G	A	L	R	L	A	S	D	G	S	V	D	.	.	.	.	F	Q	Q	P	A	E	A	G	R	F	K	V	L	T	V	N	T	L	A	G	S	G	L	F	R	M	N	V	F	A	D	L	G	L	S	D	K	L	V	V	M	Q	D	A	S	G	Q	H	R	L	W	V	R
Template Known Secondary structure								S											T	T					.	.	.	.					S	S	T	T																						G	G	G	T													S
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.					.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		1127	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.		.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		D	T	G	V	S	P	Q	S	D	D	A	M	T	L	V	K	T	.	G	G	G	D	A	S	F	T	L	G	N	T	G	G	F	V	D	L	G	T	Y	E	Y	V	L	K	S	D	G	N	S	N	W	N	L	T	N	D	V	K	P	N
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		N	S	G	S	E	P	A	S	A	N	T	L	L	L	V	Q	T	P	L	G	S	A	A	T	F	T	L	A	N	K	D	G	K	V	D	I	G	T	Y	R	Y	R	L	A	A	N	G	N	G	Q	W	S	L	V	G	A	K	A	P	P
Template Known Secondary structure				S				S	S											S	S									S	G	G	G					T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.