Job Description P52143 Confidence 100.00% Date Wed Jan 25 15:20:58 GMT 2012 Rank 1 Aligned Residues 293 % Identity 16% Template c3sljA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant Resolution 2.48 Å

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		1226	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	T	A	A	V	L	N	M	A	A	T	L	P	L	V	F	D	A	E	L	N	S	I	R	E	R	L	N	I	M	K	A	S	P	H	N	N	N	V	W	G	A	T	Y	N	T	R	N	N	V	T	T	D	A	G	A	G	F	E	Q	T	L	T	G	M	T	V	G	I	D	S	R	N	D	I	P	E	G	I
Query Conservation
Alig confidence																																																							.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		E	A	T	R	N	A	A	A	L	F	S	V	D	Y	K	A	F	L	N	E	V	A	N	L	N	K	R	M	G	D	L	R	D	I	N	G	E	A	G	A	W	A	R	I	M	S	G	T	G	S	A	S	G	.	.	.	.	G	F	S	D	N	Y	T	H	V	Q	V	G	V	D	K	K	H	E	L	D	G	L	D
Template Known Secondary structure																				T	T												T	T				S															T	T	.	.	.	.	T																			T	T
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		1002	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.					.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.
		1306	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	L	G	A	F	M	G	Y	S	H	S	H	I	G	F	D	R	G	G	H	G	S	V	G	S	Y	S	L	G	G	Y	A	S	W	E	H	E	S	G	F	Y	L	D	G	V	V	K	L	N	R	F	K	S	N	V	A	G	K	M	S	S	G	G	A	A	N	G	S	Y	H	S	N	G	L	G	G	H	I	E
Query Conservation
Alig confidence																			.																																									.	.
Template Conservation																			.																																									.	.
Template Sequence		L	F	T	G	F	T	V	T	H	T	D	S	S	A	S	A	D	.	V	F	S	G	K	T	K	S	V	G	A	G	L	Y	A	S	A	M	F	D	S	G	A	Y	I	D	L	I	G	K	Y	V	H	H	D	N	E	Y	T	A	.	.	T	F	A	G	L	G	T	R	D	Y	S	T	H	S	W	Y	A	G	A	E
Template Known Secondary structure																		S	.	S																			T	T	S																			.	.	S	S	T	T
Template Predicted Secondary structure																			.																																									.	.
Template SS confidence
		1078	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.		.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.			.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.
		1386	.	.	.	1390	.	.	.	.		.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.				.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.
Predicted Secondary structure											.																									.	.	.
Query SS confidence											.																									.	.	.
Query Sequence		T	G	M	R	F	T	D	G	N	.	W	N	L	T	P	Y	A	S	L	T	G	F	T	A	D	N	P	E	Y	H	L	S	N	G	.	.	.	M	K	S	K	S	V	D	T	R	S	I	Y	R	E	L	G	A	T	L	S	Y	N	M	R	L	G	N	G	M	E	V	E	P	W	L	K	A	A	V	R	K	E	F
Query Conservation											.																									.	.	.
Alig confidence											.																									.	.	.																										.
Template Conservation																																																																.
Template Sequence		A	G	Y	R	Y	H	V	T	E	D	A	W	I	E	P	Q	A	E	L	V	Y	G	S	V	S	G	K	Q	F	A	W	K	D	Q	G	M	H	L	S	M	K	D	K	D	Y	N	P	L	I	G	R	T	G	V	D	V	G	K	S	F	S	G	.	K	D	W	K	V	T	A	R	A	G	L	G	Y	Q	F	D	L
Template Known Secondary structure								S	S	S	S														B										T	T										B																		.	T	T															S
Template Predicted Secondary structure																																																																.
Template SS confidence
		1155	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.		.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.
		1462	.	.	.	.	.	.	.	1470	.	.	.	.	.			.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		V	D	D	N	R	V	K	V	N	S	D	G	N	F	.	.	V	N	Y	L	S	G	R	R	G	I	Y	Q	A	G	I	K	A	S	F	S	S	T	L	S	G	H	L	G	V	G	Y	S	H	S	A	G	V	E	S	P	W	N	A	V	A	G	V	N	W	S	F
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		L	A	N	G	E	T	V	L	R	D	A	S	G	E	K	R	I	K	G	E	K	D	S	R	M	L	M	S	V	G	L	N	A	E	I	R	D	N	V	R	F	G	L	E	F	E	K	S	A	F	G	K	Y	N	V	D	N	A	V	N	A	N	F	R	Y	S	F
Template Known Secondary structure												T	T																								T	T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		1234	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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