Job Description P52143 Confidence 83.95% Date Wed Jan 25 15:20:58 GMT 2012 Rank 52 Aligned Residues 248 % Identity 12% Template c3p4gD_ PDB info PDB header:antifreeze protein Chain: D: PDB Molecule:antifreeze protein; PDBTitle: x-ray crystal structure of a hyperactive, ca2+-dependent, beta-helical2 antifreeze protein from an antarctic bacterium Resolution 1.70 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		N	N	F	V	G	Q	A	N	N	T	T	I	N	G	G	R	Q	S	I	H	D	G	G	I	S	T	G	T	T	I	E	S	G	N	Q	D	V	Y	K	G	G	I	S	N	G	T	T	I	K	G	G	A	S	.	.	R	V	E	G	G	S	A	N	G	I	L	I	D	G	G	S	Q	I	V	K	V	Q	G	H	A
Query Conservation																																																							.	.
Alig confidence																																																							.	.
Template Conservation
Template Sequence		S	A	F	D	A	S	N	N	N	V	A	V	T	G	N	V	S	A	T	L	N	V	L	A	G	D	D	K	V	S	I	D	G	N	V	E	D	V	L	V	A	A	N	V	A	V	L	D	M	G	T	G	N	D	Q	L	Y	V	A	G	D	V	L	G	K	I	D	A	G	T	G	N	D	E	I	Y	I	K	G	D
Template Known Secondary structure						S	S							S	S		B		S						S	S							S	S		B						S	T	T			S					S	S							S	S		B		S						S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240
Predicted Secondary structure																													.	.	.																																										.	.	.	.	.
Query SS confidence																													.	.	.																																										.	.	.	.	.
Query Sequence		D	G	T	T	I	N	K	S	G	S	Q	D	V	V	Q	G	S	L	A	T	N	T	T	I	N	G	G	.	.	.	R	Q	Y	V	E	Q	S	T	V	E	T	T	T	I	K	N	G	G	E	Q	R	V	Y	E	S	R	A	L	D	T	T	I	E	G	G	T	Q	S	L	N	S	.	.	.	.	.	K	S	T	A
Query Conservation																													.	.	.																																										.	.	.	.	.
Alig confidence																													.	.	.																																										.	.	.	.	.
Template Conservation
Template Sequence		V	S	A	A	V	D	A	G	T	G	N	D	E	V	Y	I	G	G	N	L	S	G	D	L	D	A	G	T	D	N	D	N	I	Q	I	G	G	D	V	N	A	A	L	N	A	G	T	G	N	D	N	L	I	I	G	H	D	V	S	G	I	V	N	M	G	T	D	N	D	T	V	E	V	G	R	T	I	N	A	S
Template Known Secondary structure		B		S						S	S							S	S		B		S						S	S							S	S		B		S						S	S							S	S		B		S						S	S							S	S		B		T	T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	T	H	I	Y	S	G	G	T	Q	I	V	D	N	T	S	T	S	D	V	I	E	V	Y	S	G	G	V	L	D	V	R	G	G	T	A	T	N	V	T	Q	H	D	G	A	I	L	K	T	N	T	N	G	T	T	V	S	G	T	N	S	E	G	A	F	S	I	H	N	H	V	A	D	N	V	L	L	E	N
Query Conservation
Alig confidence																																																								.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		G	K	V	L	L	D	T	G	D	D	S	L	L	V	S	G	D	L	F	G	E	V	D	G	G	T	G	N	D	T	I	I	I	A	G	K	V	S	G	N	I	Q	G	G	T	G	N	D	I	V	R	V	Q	S	.	.	.	.	.	.	Q	V	W	A	E	A	N	I	S	L	G	T	G	D	D	V	L	I	V	E
Template Known Secondary structure								S	S	S						S	S		B	S	S						S	S								S		B		S						S	S								S	.	.	.	.	.	.		B		T	T							S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.							.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	H	L	D	I	N	A	Y	G	S	A	N	K	T	I	I	K	D	K	G	T	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	L	H	G	T	V	A	G	N	E	G	D	D	S	I	Y	L	K	F	Y	T	K	E
Template Known Secondary structure		S		B		S						S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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