Job Description P52143 Confidence 9.62% Date Wed Jan 25 15:20:58 GMT 2012 Rank 67 Aligned Residues 136 % Identity 9% Template c2y0hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:probable porin; PDBTitle: crystal structure of pseudomonas aeruginosa opdl Resolution 2.20 Å

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		1381	.	.	.	.	.	.	.	.	1390	.	.	.		.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		G	G	H	I	E	T	G	M	R	F	T	D	G	.	N	W	N	L	T	P	Y	A	S	L	T	G	F	T	A	D	N	P	E	Y	H	L	S	N	G	M	K	S	K	S	V	D	T	R	S	I	Y	R	E	L	G	A	T	L	S	Y	N	M	R	L	G	N	G	M	E	V	E	P	W	L	K	A	A	V	R	K
Query Conservation															.
Alig confidence															.																																																											.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		Q	H	Y	L	G	L	L	H	T	L	P	L	G	E	G	L	S	L	R	S	D	L	R	Y	F	D	S	G	E	D	G	A	A	I	S	G	P	V	D	N	R	N	L	N	A	M	L	T	L	R	A	G	A	H	A	F	G	I	G	V	Q	K	M	I	G	N	D	A	F	P	V	L	.	.	.	.	.	.	.	.
Template Known Secondary structure														S	T	T																T	T		T	T																	T	T												S	S	S					B	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.					.	.	.	.	1500	.	.	.	.	.	.	.	.							.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.														.	.	.	.	.	.
Query SS confidence																																						.	.	.	.														.	.	.	.	.	.
Query Sequence		E	F	V	D	D	N	R	V	K	V	N	S	D	G	N	F	V	N	Y	L	S	G	R	R	G	I	Y	Q	A	G	I	K	A	S	F	S	.	.	.	.	S	T	L	S	G	H	L	G	V	G	Y	S	H	.	.	.	.	.	.	S	A	G	V	E	S	P	W	N	A	V	A	G	V	N	W	S	F
Query Conservation																																						.	.	.	.														.	.	.	.	.	.
Alig confidence		.	.																																			.	.	.	.														.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	N	G	Y	T	T	P	Y	V	A	N	L	M	A	Y	Q	T	F	T	R	P	Q	E	K	S	W	Q	L	R	Y	D	Y	D	F	A	G	L	G	L	P	G	L	N	L	M	T	R	Y	V	Q	G	R	D	I	D	R	G	A	G	R	A	D	D	S	E	W	E	R	N	T	D	L	S	Y	V	I
Template Known Secondary structure		.	.	T	T	T		B				T	T			S	S			S		S	T	T													T	T	T	T		T	T																S	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions