Job Description P52143 Confidence 100.00% Date Wed Jan 25 15:20:58 GMT 2012 Rank 5 Aligned Residues 261 % Identity 17% Template c2qomB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain. Resolution 2.66 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1249	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		I	R	E	R	L	N	I	M	K	A	S	P	H	N	N	N	V	W	G	A	T	Y	N	T	R	N	N	V	T	T	D	A	G	A	G	F	E	Q	T	L	T	G	M	T	V	G	I	D	S	R	N	D	I	P	E	G	I	T	T	L	G	A	F	M	G	Y	S	H	S	H	I	G	F	.	D	R	G	G	H	G
Query Conservation																																																																											.
Alig confidence										.	.	.																				.	.	.	.																					.	.	.																	.
Template Conservation										.	.	.																				.	.	.	.																					.	.	.
Template Sequence		L	N	K	R	M	G	D	L	.	.	.	R	D	E	A	G	A	W	A	R	I	M	S	G	T	G	S	A	S	G	.	.	.	.	G	F	S	D	N	Y	T	H	V	Q	V	G	V	D	K	K	H	E	L	G	.	.	.	L	D	L	F	T	G	F	T	V	T	H	T	D	S	S	A	S	A	D	V	F	S	G
Template Known Secondary structure						T				.	.	.																		S	T	.	.	.	.	T																				.	.	.																			S	S
Template Predicted Secondary structure										.	.	.																				.	.	.	.																					.	.	.
Template SS confidence
		1025	.	.	.	.	1030	.	.				.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.					.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.				.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.
		1328	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.		.	.	.	.	.	.	.	1400	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		S	V	G	S	Y	S	L	G	G	Y	A	S	W	E	H	E	S	G	F	Y	L	D	G	V	V	K	L	N	R	F	K	S	N	V	A	G	K	M	S	S	G	G	A	A	N	G	S	Y	H	S	N	G	L	G	G	H	I	E	T	G	M	R	F	T	D	.	G	N	W	N	L	T	P	Y	A	S	L	T	G	F
Query Conservation																																																																			.
Alig confidence																																						.	.	.	.	.																									.
Template Conservation																																						.	.	.	.	.
Template Sequence		K	T	K	S	V	G	A	G	L	Y	A	S	A	M	F	D	S	G	A	Y	I	D	L	I	G	K	Y	V	H	H	D	N	E	Y	T	A	.	.	.	.	.	T	F	A	T	R	D	Y	S	T	H	S	W	Y	A	G	A	E	A	G	Y	R	Y	H	V	T	E	D	A	W	I	E	P	Q	A	E	L	V	Y	G
Template Known Secondary structure																	T	T	S																			.	.	.	.	.	S																									T	T
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		1099	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.						.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.
		1407	.	.	1410	.	.	.	.	.	.	.	.			.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470			.	.	.	.	.	.	.	.	.	1480	.	.
Predicted Secondary structure														.	.																																																					.	.
Query SS confidence														.	.																																																					.	.
Query Sequence		T	A	D	N	P	E	Y	H	L	S	N	G	.	.	M	K	S	K	S	V	D	T	R	S	I	Y	R	E	L	G	A	T	L	S	Y	N	M	R	L	G	N	G	M	E	V	E	P	W	L	K	A	A	V	R	K	E	F	V	D	D	N	R	V	K	V	N	.	.	S	D	G	N	F	V	N	Y	L	S	G	R
Query Conservation														.	.																																																					.	.
Alig confidence														.	.																									.	.																											.	.
Template Conservation																																								.	.
Template Sequence		S	V	S	G	K	Q	F	A	W	K	D	G	M	H	L	S	M	K	D	K	D	Y	N	P	L	I	G	R	T	G	V	D	V	G	K	S	F	S	.	.	G	K	W	K	V	T	A	R	A	G	L	G	Y	Q	F	D	L	L	A	N	G	E	T	V	L	R	D	A	S	G	E	K	R	I	K	G	E	K	D	S
Template Known Secondary structure										B					S	B																								.	.																				T		T	T	B				T	T	S	S			S	S	S	S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		1177	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.			.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.
		1483	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	I	Y	Q	A	G	I	K	A	S	F	S	S	T	L	S	G	H	L	G	V	G	Y	S	H	S	A	G	V	E	S	P	W	N	A	V	A	G	V	N	W	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	L	M	S	V	G	L	N	A	E	I	R	D	N	V	R	F	G	L	E	F	E	K	S	A	F	G	K	Y	N	V	D	N	A	V	N	A	N	F	R	Y	S	F
Template Known Secondary structure														T	T	T					.							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		1257	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions