Job Description P52143 Confidence 97.65% Date Wed Jan 25 15:20:58 GMT 2012 Rank 27 Aligned Residues 231 % Identity 13% Template c1satA_ PDB info PDB header:hydrolase (serine protease) Chain: A: PDB Molecule:serratia protease; PDBTitle: crystal structure of the 50 kda metallo protease from s.2 marcescens Resolution 1.75 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		M	N	R	T	S	P	Y	Y	C	R	R	S	V	L	S	L	L	I	S	A	L	I	Y	A	P	P	G	M	A	A	F	T	T	N	V	I	G	V	V	N	D	E	T	V	D	G	N	Q	K	V	D	E	R	G	T	T	N	N	T	H	I	I	N	H	G	Q	Q	N	V	H	.	.	G	G	V	S	N	G	S	L
Query Conservation																																																																								.	.
Alig confidence																																																																								.	.
Template Conservation
Template Sequence		G	D	N	G	G	H	Y	A	A	A	P	L	L	D	D	I	A	A	I	Q	H	L	Y	G	A	N	L	S	T	R	T	G	D	T	V	Y	G	F	N	S	N	T	G	R	D	F	L	S	T	T	S	N	S	Q	K	V	I	F	A	A	W	D	A	G	G	N	D	T	F	D	F	S	G	Y	T	A	N	Q	R	I
Template Known Secondary structure			B		T	T					S															B		T	T	T	T		S						T	T			S			G	G	G	B		S	S	T	T	S										S	S							T	T			S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	S	G	G	Y	Q	D	I	G	S	H	N	N	F	V	G	Q	A	N	N	T	T	I	N	G	G	R	Q	S	I	H	D	G	G	I	S	T	G	T	T	I	E	S	G	N	Q	D	V	Y	K	G	G	I	S	N	G	T	T	I	K	G	G	A	S	R	V	E	G	G	S	A	N	G	I	L	I	D	G	G
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		N	L	N	E	K	S	F	S	D	V	G	G	.	.	.	.	L	K	G	N	V	S	I	A	A	G	V	T	I	E	N	A	I	G	G	S	G	N	D	V	I	V	G	N	A	A	N	N	V	L	K	G	G	A	G	N	D	V	L	F	G	G	G	G	A	D	E	L	W	G	G	A	G	K	D	I	F	V	F	S
Template Known Secondary structure				S	T	T				B		T	T	.	.	.	.		B	S						T	T										S	S								S	S								S	S								S	S								S	S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.								.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																																																.	.	.	.	.	.	.
Query SS confidence													.	.																																																.	.	.	.	.	.	.
Query Sequence		S	Q	I	V	K	V	Q	G	H	A	D	.	.	G	T	T	I	N	K	S	G	S	Q	D	V	V	Q	G	S	L	A	T	N	T	T	I	N	G	G	R	Q	Y	V	E	Q	S	T	V	E	T	T	T	I	K	N	G	G	E	Q	R	.	.	.	.	.	.	.	V	Y	E	S	R	A	L	D	T	T	I	E	G
Query Conservation													.	.																																																.	.	.	.	.	.	.
Alig confidence													.	.																																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	S	D	S	A	P	G	A	S	D	W	I	R	D	F	Q	K	G	I	D	K	I	D	L	S	F	F	D	K	E	A	N	S	S	S	F	I	H	F	V	D	H	F	S	G	T	A	G	E	A	L	L	S	Y	N	A	S	S	N	V	T	D	L	S	V	N	I	G	G	H	A	A	P	D	F	L	V	K	I
Template Known Secondary structure			G	G	G	G		T	T	S					S	S			T	T	T	S												T		T	T	S	S				S	S			S		T	T								T	T	T	T								S	S			S	S		S
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	Q	S	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	Q	V	D	V
Template Known Secondary structure			S				T
Template Predicted Secondary structure
Template SS confidence
		460	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions