Job Description P0ABG7 Confidence 2.32% Date Thu Jan 5 11:15:28 GMT 2012 Rank 51 Aligned Residues 85 % Identity 13% Template d1oede_ SCOP info Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Resolution 4.0

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		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.
Predicted Secondary structure																																																														.	.															.	.
Query SS confidence																																																														.	.															.	.
Query Sequence		L	A	L	Y	I	L	L	I	M	R	G	L	W	I	A	A	R	A	Q	T	T	F	G	R	V	M	A	G	G	L	M	L	I	L	F	V	Y	V	F	V	N	I	G	M	V	S	G	I	L	P	V	V	G	V	P	L	P	L	V	S	.	.	Y	G	G	S	A	L	I	V	L	M	A	G	F	G	.	.	I	V
Query Conservation																																																														.	.															.	.
Alig confidence																								.	.	.																.	.																			.	.															.	.
Template Conservation																								.	.	.																.	.
Template Sequence		C	V	L	I	S	S	L	V	V	L	V	Y	F	L	P	A	Q	A	G	G	Q	K	.	.	.	C	T	L	S	I	S	V	L	L	A	Q	T	I	F	L	.	.	F	L	I	A	Q	K	V	P	E	T	S	L	N	V	P	L	I	G	K	Y	L	I	F	V	M	F	V	S	M	L	I	V	M	N	C	V	I	V
Template Known Secondary structure																		T			T	T		.	.	.																.	.														S					S
Template Predicted Secondary structure																								.	.	.																.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	I	H	T	H	R	K	M	L	S	K	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	V	S	L	R	T	G	K	V	I	D	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions