Job Description P0ABG7 Confidence 3.36% Date Thu Jan 5 11:15:28 GMT 2012 Rank 24 Aligned Residues 82 % Identity 15% Template d1oedb_ SCOP info Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Resolution 4.0

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		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.
Predicted Secondary structure																																																												.	.																	.	.
Query SS confidence																																																												.	.																	.	.
Query Sequence		L	A	L	Y	I	L	L	I	M	R	G	L	W	I	A	A	R	A	Q	T	T	F	G	R	V	M	A	G	G	L	M	L	I	L	F	V	Y	V	F	V	N	I	G	M	V	S	G	I	L	P	V	V	G	V	P	L	P	L	.	.	V	S	Y	G	G	S	A	L	I	V	L	M	A	G	F	G	.	.	I	V
Query Conservation																																																												.	.																	.	.
Alig confidence																							.	.	.	.	.	.																																.	.																	.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		C	I	L	I	S	I	L	A	I	L	V	F	Y	L	P	P	D	A	G	E	K	.	.	.	.	.	.	M	S	L	S	I	S	A	L	L	A	V	T	V	F	L	L	L	L	A	D	K	V	P	E	T	S	L	S	V	P	I	I	I	R	Y	L	M	F	I	M	I	L	V	A	F	S	V	I	L	S	V	V	V
Template Known Secondary structure																				G	G	G	.	.	.	.	.	.																													S					T	T
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		357	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	I	H	T	H	R	K	M	L	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	L	H	H	R	S	A	M	V	A	D
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions