Job Description P0ABG7 Confidence 1.95% Date Thu Jan 5 11:15:28 GMT 2012 Rank 75 Aligned Residues 153 % Identity 13% Template c3pjzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:potassium uptake protein trkh; PDBTitle: crystal structure of the potassium transporter trkh from vibrio2 parahaemolyticus Resolution 3.51 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	N	P	N	K	K	T	F	W	D	K	V	H	L	D	P	T	M	L	L	I	L	L	A	L	L	V	Y	S	A	L	V	I	W	S	A	S	G	Q	D	I	G	M	M	E	R	K	I	G	Q	I	A	M	G	L	V	I	M	V	V	M	A	Q	I	P	P	R	V	Y	E	G	W	A	P	Y	L	Y	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	G	V	H	P	K	Y	Y	W	K	D	P	E	F	R	A	F	I	F	I	Q	V	L	L	F	L	V	C	F	L	L	L	L	K	H	H	S	Y	T	S	P	Y	D	A	F	D	Q	A	L	F	Q	T	V	S	I	S	T	T	A	G	F	T	T	T	G	F	A	D	W	P	L	F	L	P	V	L	L	L	F
Template Known Secondary structure		T	S	T	T							T	S																								T	T			S	S															T	T	T	T					S				S	S			T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		82																						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	L	L	V	A	V	D	A	F	G	A	I	S	K	G	A	Q	R	W	L	D	L	G	I	V	R	F	Q	P	S	E	I	A	K	I	A	V	P	L	M	V	A	R	F	I	N	R	D	V	C	P	P	S	L	K	N	T
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	F	I	G	G	C	A	G	S	T	G	G	G	M	K	V	I	R	I	L	L	L	T	L	Q	G	A	R	E	L	K	R	L	V	H	P	R	A	V	Y	T	I	K	V	G	G	S	A	L	P	Q	R	V	V	D	A	V	W	G	F	F	S	A	Y	A	L	V	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	S		S		T	T	S	S			S	S																						S	S	S						S	S	S				T	T	T																.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	A	L	V	L	I	F	M	P	T	L	L	V	A	A	Q	P	D	L	G	T	S	I	L	V	A	L	S	G	L
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	F	V	V	C	M	L	G	L	I	A	T	G	M	D	E	L	S	A	F	S	A	V	A	A	T	L
Template Known Secondary structure		.	.	.	.	.												S	S													T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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