Return to main results Retrieve Phyre Job Id

Job DescriptionP76257
Confidence99.10%DateThu Jan 5 12:21:18 GMT 2012
Rank70Aligned Residues129
% Identity22%Templated2fwra2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLY
Query Conservation            
   

    
  
      
  

      












 
  

   




 
 
  

 
  
Alig confidence 















.















....










































Template Conservation                  .  

 

 


     ....    

   






             
 
 
   
  
  
Template Sequence  VDNAADPIPTPYFDAE. ISLRDYQEKALERWLV. . . . DKRGCIVLPTGSGKTHVAMAAINELSTPTLIVVPTLALAEQWK
Template Known Secondary structure  S











.



TT....TT

TTS

S
SS
Template Predicted Secondary structure 











.




....

















Template SS confidence 















































































   76...80.........90. ........100....... ..110.........120.........130.........140.........150
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  SRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPL
Query Conservation        
   
        
 

  
 
                                  

                
Alig confidence 





......












.......................................................
Template Conservation        ......    
        .......................................................
Template Sequence  ERLGIF. . . . . . GEEYVGEFSGRIK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGGG......
GGGBSSS
B.......................................................
Template Predicted Secondary structure  ......







.......................................................
Template SS confidence 















































































   151..... ...160.........
 
   161........170.........180.........190.........200.........210.........220.........230
Predicted Secondary structure 
































Query SS confidence 





































































Query Sequence  VTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQL
Query Conservation 
                 


   
     




  
 


                  









Alig confidence  ............................













.......




















Template Conservation  ............................        
     .......           





 
  
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . ELKPLTVSTYDSAY. . . . . . . VNAEKLGNRFMLLIFDEVHHL
Template Known Secondary structure  ............................


S.......TTTT
STGGGT
Template Predicted Secondary structure  ............................


.......






Template SS confidence 





































































   170.........180... ......190.........200....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions