Return to main results Retrieve Phyre Job Id

Job DescriptionP76257
Confidence99.04%DateThu Jan 5 12:21:18 GMT 2012
Rank74Aligned Residues129
% Identity25%Templated1s2ma1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.. .......70.........80.........90
Predicted Secondary structure 














......





Query SS confidence 













































. . . . . .



























Query Sequence  GFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPALRA. . . . . . KKKVIISTGSKALQDQLYSRDLPTVSKA
Query Conservation      
  
      
  

      












 
  

  ...... 




 
 
  

 
        
   
Alig confidence 
















....
























......

















.








Template Conservation        

  

  

 ....
 



 
 






      
                
   
     .         
Template Sequence  FEKPSPIQEEAIPVAIT. . . . GRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTS. QVVRTLGKH
Template Known Secondary structure 

S

....T



TTS


TTS
S


SS.TTT
Template Predicted Secondary structure 





....






















.

Template SS confidence 















































































   66...70.........80.. .......90.........100.........110.........120.........130. ........140
 
   91........100.........110.........120.........130.........140.........150.........160.........170
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  LKYTGNVALLKGRSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNCLG
Query Conservation 
        
 

  
 
                                  

                
         
Alig confidence 











....................................................................
Template Conservation              ....................................................................
Template Sequence  CGISCMVTTGGT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT


SSS....................................................................
Template Predicted Secondary structure 




....................................................................
Template SS confidence 















































































   141........150..
 
   171........180.........190.........200.........210.........220.........230
Predicted Secondary structure 




























Query SS confidence 



























































Query Sequence  SDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQL
Query Conservation          


   
     




  
 


                  









Alig confidence  ........




































....










Template Conservation  ........                  
                 
....  




 
  
Template Sequence  . . . . . . . . NLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDC. . . . SLFIMDEADKM
Template Known Secondary structure  ........
TTS

S
TT
S

TT
....
S
Template Predicted Secondary structure  ........












....
Template SS confidence 



























































   153......160.........170.........180......... 190.........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions