Job Description P76257 Confidence 79.32% Date Thu Jan 5 12:21:18 GMT 2012 Rank 359 Aligned Residues 47 % Identity 23% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40												.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.													.	.									.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.													.	.									.
Query Sequence		Q	R	Q	M	A	V	A	V	T	Q	A	I	E	K	G	Q	P	.	.	.	.	.	.	.	.	.	.	.	L	V	V	E	A	G	T	G	T	G	K	T	.	.	Y	A	Y	L	A	P	A	L	.	R	A	K	K	K	V	I	I	S	T
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.													.	.									.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.													.	.									.
Template Conservation
Template Sequence		I	K	I	V	Y	E	E	L	V	K	L	L	G	E	E	A	K	K	L	E	L	N	P	K	K	Q	N	V	I	L	L	V	G	I	Q	G	S	G	K	T	T	T	A	A	K	L	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A
Template Known Secondary structure																S								S	S	S										S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions