Job Description P76257 Confidence 81.05% Date Thu Jan 5 12:21:18 GMT 2012 Rank 336 Aligned Residues 47 % Identity 34% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.																.	.									.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																.	.									.
Query Sequence		Q	R	Q	M	A	V	A	V	T	Q	A	I	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	P	L	V	V	E	A	G	T	G	T	G	K	T	.	.	Y	A	Y	L	A	P	A	L	.	R	A	K	K	K	V	I	I	S	T
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.																.	.									.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																.	.									.
Template Conservation
Template Sequence		R	K	M	I	Q	H	A	V	F	K	E	L	V	K	L	V	D	P	G	V	K	A	W	T	P	T	K	G	N	V	I	M	F	V	G	L	Q	G	S	G	K	T	T	T	C	S	K	L	A	Y	Y	Y	Q	R	K	G	W	K	T	C	L	I	C
Template Known Secondary structure																												S	S								S	T	T	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions