Job Description P76257 Confidence 90.86% Date Thu Jan 5 12:21:18 GMT 2012 Rank 239 Aligned Residues 48 % Identity 27% Template c1xwiA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:skd1 protein; PDBTitle: crystal structure of vps4b Resolution 2.80 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.															.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	R	Q	M	A	V	A	V	T	Q	A	I	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	P	L	V	V	E	A	G	T	G	T	G	K	T	Y	A	Y	L	A	P	A	L	R	A	K	K	K	V	I	I	S	T
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	E	G	A	K	E	A	L	K	E	A	V	I	L	P	I	K	F	P	H	L	F	T	G	K	R	T	P	W	R	G	I	L	L	F	G	P	P	G	T	G	K	S	Y	L	A	K	A	V	A	T	E	A	N	N	S	T	F	F	S	I
Template Known Secondary structure		S																			G	G	G	S		T	T					S						S	S	S	S	S													T	T	S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions