Job Description P32141 Confidence 91.64% Date Thu Jan 5 11:49:28 GMT 2012 Rank 234 Aligned Residues 164 % Identity 15% Template d1gk8a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.4

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L
Query Conservation
Alig confidence																						.	.	.	.	.	.	.																																									.
Template Conservation																						.	.	.	.	.	.	.																																									.
Template Sequence		R	A	V	A	K	E	L	G	V	P	I	I	M	H	D	Y	L	T	G	G	.	.	.	.	.	.	.	F	T	A	N	T	S	L	A	I	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N	H	G	I	H	F	R	V	.	L	A	K	A	L	R	M	S	G	G	D	H
Template Known Secondary structure						T	T	T	T		S											.	.	.	.	.	.	.															T								T	T						S		S	S	S	S						.											S
Template Predicted Secondary structure																						.	.	.	.	.	.	.																																									.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.																						.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	V	I	L	S	S	G	V	D	E	K	L	F	P	R	A	V	R	V	A	M	T	A	G	A	S	G	F	L
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation									.	.	.																																																																.	.
Template Sequence		L	H	S	G	T	V	V	.	.	.	G	K	L	E	G	E	R	E	V	T	L	G	F	V	D	L	M	R	D	D	Y	V	E	K	D	R	S	R	G	I	Y	F	T	Q	D	W	S	M	P	G	V	M	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	V	E	I	F	G	D	.	.	D	A	C	L	Q
Template Known Secondary structure							S	S	.	.	.	S	S	S																	S					B	G	G	G	T	B		S															S	S			G	G	G										S	.	.	S	S
Template Predicted Secondary structure									.	.	.																																																																.	.
Template SS confidence
		326	.	.	.	330	.	.				.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.	400
		251	.	.	.	.	.	.	.	.											260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	R	A	V	W	A	S	V	.	.	.	.	.	.	.	.	.	.	V	G	L	P	D	N	E	L	M	L	R	D	V	C	A	P	K	L	Q	Q	L	G	D	I	V	D	E	M	M
Query Conservation											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	G	G	T	L	G	H	P	W	G	N	A	P	G	A	A	A	N	R	V	A	L	E	A	C	T	Q	A	R	N	E	G	R	D	L	A	R	E	G	G	D	V	I	R	S	A	C
Template Known Secondary structure			S					T	S	T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions