Return to main results Retrieve Phyre Job Id

Job DescriptionP32141
Confidence75.94%DateThu Jan 5 11:49:28 GMT 2012
Rank333Aligned Residues51
% Identity14%Templated1bf2a3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120........ .130.........140.........150.......
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Query Sequence  PLQIKQDGGKALKLLVL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WRSDEDAQQRLDMVKEFNELCHSHGLVSI
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Template Sequence  ASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVY
Template Known Secondary structure  T

S

B
BS
TTTTSSTT

TT


S


BS
SS
B
GGG
S

STTTT
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   211........220.........230.........240.........250.........260.........270.........280.........290
 
   158.160..
Predicted Secondary structure 
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Query Sequence  IEPVV
Query Conservation   
   
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Template Sequence  MDVVY
Template Known Secondary structure 

Template Predicted Secondary structure 

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   291....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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