Return to main results Retrieve Phyre Job Id

Job DescriptionP32141
Confidence96.59%DateThu Jan 5 11:49:28 GMT 2012
Rank119Aligned Residues110
% Identity17%Templatec3t4cD_
PDB info PDB header:transferaseChain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160.........170.........180.........190.
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  PLQIKQDGGKALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDAAKELGDSGADL
Query Conservation 

 
 







 

    
            
 
 
   
 


 
              
  
  


   





Alig confidence 




















......






















........








.......

.


Template Conservation 
      

       

   ...... 
 
  
     
 

   

  ........
   

 
 .......  .

 
Template Sequence  AGRLKEICAKLNVPFIYKSSM. . . . . . DEGLRILGEVKRQLGLPVLTDVH. . . . . . . . SIDEIEQVA. . . . . . . SV. VDV
Template Known Secondary structure  TT




......T



........S.......TT.
S
Template Predicted Secondary structure 













......





........
........
Template SS confidence 















































































   33......40.........50... ......60.........70...... ...80..... .. ..90
 
   192.......200.........210.........220........ .230.........240.... .....250.
Predicted Secondary structure 















..


......


Query SS confidence 




































. .















. . . . . .






Query Sequence  YKVEMPLYGKGPQQELLCASQRLNDHINMPWVILSSG. . VDEKLFPRAVRVAMTA. . . . . . GASGFLA
Query Conservation   
   

                     

 





..   
 
   
  
  
......

 

  
Alig confidence 


.......



















.





..















......






Template Conservation   

.......

    
  

  

  


.
 

 
            
    
      

  
 
Template Sequence  LQT. . . . . . . PAFLCRQTDFIHACARSGKP. VNIKKGQFLAPHDMKNVIDKAREAAREAGLSEDRFMA
Template Known Secondary structure  .......
GGGTT
TTSS
.

TTS
GGGTT

S

Template Predicted Secondary structure 
.......







.









Template SS confidence 



































































   107.. 110.........120......... 130.........140.........150.........160......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions