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Job Description | P32141 | Confidence | 96.59% | Date | Thu Jan 5 11:49:28 GMT 2012 |
Rank | 119 | Aligned Residues | 110 |
% Identity | 17% | Template | c3t4cD_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; |
PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria
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Resolution | 1.95 Å |
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112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | L | Q | I | K | Q | D | G | G | K | A | L | K | L | L | V | L | W | R | S | D | E | D | A | Q | Q | R | L | D | M | V | K | E | F | N | E | L | C | H | S | H | G | L | V | S | I | I | E | P | V | V | R | P | P | R | R | G | D | K | F | D | R | E | Q | A | I | I | D | A | A | K | E | L | G | D | S | G | A | D | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | G | R | L | K | E | I | C | A | K | L | N | V | P | F | I | Y | K | S | S | M | . |
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D | E | G | L | R | I | L | G | E | V | K | R | Q | L | G | L | P | V | L | T | D | V | H | . |
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V | D | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
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. | . | . | 80 | . | . | . | . | . | |
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192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | K | V | E | M | P | L | Y | G | K | G | P | Q | Q | E | L | L | C | A | S | Q | R | L | N | D | H | I | N | M | P | W | V | I | L | S | S | G | . |
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V | D | E | K | L | F | P | R | A | V | R | V | A | M | T | A | . |
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G | A | S | G | F | L | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | Q | T | . |
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P | A | F | L | C | R | Q | T | D | F | I | H | A | C | A | R | S | G | K | P | . |
V | N | I | K | K | G | Q | F | L | A | P | H | D | M | K | N | V | I | D | K | A | R | E | A | A | R | E | A | G | L | S | E | D | R | F | M | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
107 | . | . | |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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