Job Description P32141 Confidence 97.49% Date Thu Jan 5 11:49:28 GMT 2012 Rank 73 Aligned Residues 116 % Identity 12% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	A	Q	.	.	.	.	.	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																										.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Sequence		V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	G	L	E	E	G	L	K	I	F	E	K	V	K	A	E	F	G	I	P	V	I	T	D	V	H	.	.	.	.	.	.	.	.	E	P	H	Q	C	Q	P	V	A	.	.	.	.	.	.	.	E
Template Known Secondary structure									T									S			T	T	S		T	T	S				S																										.	.	.	.	.	.	.	.	S									.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.								.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		S	G	A	D	L	Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I	L	S	S	G	V	.	.	D	E	K	L	F	P	R	A	V	R	V	A	M	T	A	G	A	S	G	F	L	A
Query Conservation																																													.	.
Alig confidence			.							.	.	.	.	.	.	.																					.								.	.
Template Conservation			.							.	.	.	.	.	.	.																					.
Template Sequence		V	.	C	D	V	I	Q	L	.	.	.	.	.	.	.	P	A	F	L	A	R	Q	T	D	L	V	V	A	M	A	K	T	G	N	V	.	V	N	I	K	K	P	Q	F	L	S	P	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	K	L	I	L
Template Known Secondary structure			.		S					.	.	.	.	.	.	.		G	G	G	T	T															.							T	T	S		G	G	G											T	T
Template Predicted Secondary structure			.							.	.	.	.	.	.	.																					.
Template SS confidence
		104		.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions