Job Description P32141 Confidence 97.33% Date Thu Jan 5 11:49:28 GMT 2012 Rank 86 Aligned Residues 234 % Identity 11% Template c3s5oA_ PDB info PDB header:lyase Chain: A: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase, mitochondrial; PDBTitle: crystal structure of human 4-hydroxy-2-oxoglutarate aldolase bound to2 pyruvate Resolution 1.97 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.												.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																						.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	A	M	R	M	M	F	A	A	A	G	A	P	A	P	V	A	D	S	.	V	L	T	D	F	K	V	N	A	A	K	A	L	S	P	Y	A	S	A	I	L	V	.	.	.	.	.	.	.	.	.	.	.	D	Q	Q	F	C	Y	R	Q	V	V	E	Q	N	A	I	A	K	S	C	A	M	I	V	A	A	D
Query Conservation																						.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	D	I	A	G	I	Y	P	P	V	T	T	P	F	T	A	T	A	E	V	D	Y	G	K	L	E	E	N	L	H	K	L	G	T	F	P	F	R	G	F	V	V	Q	G	S	N	G	E	F	P	F	L	T	S	S	E	R	L	E	V	V	S	R	V	R	Q	A	M	P	K	N	R	L	L	L	A	G	S	G
Template Known Secondary structure											B					B		T	T	S		B													T	T	S			S					S	S	G	G	G	T	G	G	G	S															T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		E	F	I	P	G	N	G	I	P	V	D	S	V	V	I	D	R	K	I	N	P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	.	.	L	V	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D
Query Conservation																																				.	.
Alig confidence						.	.	.	.	.	.							.	.	.	.															.	.																									.	.	.							.	.
Template Conservation						.	.	.	.	.	.							.	.	.	.																																									.	.	.							.	.
Template Sequence		C	E	S	T	.	.	.	.	.	.	Q	A	T	V	E	M	.	.	.	.	T	V	S	M	A	Q	V	G	A	D	A	A	M	V	V	T	P	C	Y	Y	R	G	R	M	S	S	A	A	L	I	H	H	Y	T	K	V	A	D	L	S	.	.	.	P	I	P	V	V	L	.	.	Y	S	V	P	A	N	T	G	L
Template Known Secondary structure			S	S		.	.	.	.	.	.							.	.	.	.							T	T		S									T	T	G	G	G																		.	.	.	S	S					.	.								S
Template Predicted Secondary structure						.	.	.	.	.	.							.	.	.	.																																									.	.	.							.	.
Template SS confidence
		112	.	.	.							.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.			.	.	170	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L	Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I	L	S	S	G	V	D	E	K	L	F	P	R	A	V	R	V	A	M	T	A	G	A	S	G	F
Query Conservation
Alig confidence					.											.	.	.	.	.												.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation					.											.	.	.	.	.												.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		D	L	P	.	V	D	A	V	V	T	L	S	Q	H	.	.	.	.	.	P	N	I	V	G	M	D	S	G	G	D	.	.	.	.	.	.	.	V	T	R	I	G	L	I	V	H	K	T	R	K	Q	D	F	Q	V	L	A	G	S	A	G	.	.	.	.	.	.	F	L	M	A	S	Y	A	L	G	A	V	G	G
Template Known Secondary structure					.									T	S	.	.	.	.	.	T	T							S			.	.	.	.	.	.	.											T	T	T	S	S		B			B	S	S	G	G	.	.	.	.	.	.	G								T
Template Predicted Secondary structure					.											.	.	.	.	.												.	.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		177	.	.		180	.	.	.	.	.	.	.	.	.						190	.	.	.	.	.	.	.	.	.	200								.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.							.	.	.	.	.	230	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	R	A	V	W	A	S	V	V	G	L	P	D	N	E	L	M	L	R	D	V	C	A	P	K	L	Q	Q	L	G	D	I	V	D	E	M	M	A	K	R	R
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		V	C	A	L	A	N	V	L	G	A	Q	V	C	Q	L	E	R	L	C	C	T	G	Q	.	W	E	D	A	Q	K	L	Q	H	R	L	I	E	P	N	A	A	V	T
Template Known Secondary structure				G	G	G	G	T														T	T		.																		T	T
Template Predicted Secondary structure																									.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions