Job Description P32141 Confidence 98.59% Date Thu Jan 5 11:49:28 GMT 2012 Rank 17 Aligned Residues 203 % Identity 13% Template c3ru6C_ PDB info PDB header:lyase Chain: C: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of orotidine 5'-phosphate2 decarboxylase (pyrf) from campylobacter jejuni subsp. jejuni nctc3 11168 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		A	M	L	A	V	D	Q	R	E	A	M	R	M	M	F	A	A	A	G	A	P	A	P	V	A	D	S	V	L	T	D	F	K	V	N	A	A	K	A	L	S	P	Y	A	S	A	I	L	V	D	.	.	.	.	Q	Q	F	C	Y	R	Q	V	V	E	Q	N	A	I	A	K	S	C	A	M	I	V	A	A	D	E
Query Conservation																																																				.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.														.	.	.	.					.																				.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																						.																				.	.
Template Sequence		L	C	V	A	L	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	K	E	E	C	L	Q	L	A	.	K	E	L	K	N	L	D	I	W	L	K	V	G	L	R	A	Y	L	R	D	G	.	F	K	F	I	E	E	L	K	K	V	D	D	F	K	I	F	L	D	L	.	.
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S									.			T	T	T	S	S															.																				.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																						.																				.	.
Template SS confidence
		3	.	.	.	.	.	.																				10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		F	I	P	G	N	G	I	P	V	D	S	V	V	I	D	R	K	I	N	P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.																														.	.	.
Template Conservation		.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		.	.	.	K	F	H	D	I	P	N	T	M	A	D	A	.	.	.	.	C	E	E	V	S	K	L	G	V	D	M	I	N	I	H	A	S	A	G	K	I	.	.	.	.	.	.	.	.	A	I	Q	E	V	M	T	R	L	S	K	F	S	K	R	P	L	V	L	A	V	S	A	L	T	S	F	D	E	E	N	F
Template Known Secondary structure		.	.	.				S									.	.	.	.						T	T	T		S						G	G	G				.	.	.	.	.	.	.	.										T	T	S	S	S									S		T	T
Template Predicted Secondary structure		.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
					60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	K	F	D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L	Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I	L	S	S	G	V	D	E	K	L	F	P	R	A	V	R	V	A	M	T	A	G
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		F	S	I	Y	R	Q	K	I	E	E	A	V	I	N	F	S	K	I	S	Y	E	N	G	L	D	G	M	V	C	S	.	.	.	.	.	.	.	.	.	.	.	.	V	F	E	S	K	K	I	K	E	H	T	S	S	N	F	L	T	L	T	P	G	I	R	P	F	G	.	.	A	N	L	A	M	A	R	E	N	L
Template Known Secondary structure						S	S																T	T								.	.	.	.	.	.	.	.	.	.	.	.	T	T	T								S		T	T	S						S			T	T		.	.									T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.													.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	G	F	L	A	G	R	A	V	W	A	S	V	V	G	L	P	D	N	E	L	M	L	R	D	V	C	A	P	K	L	Q	Q	L
Query Conservation
Alig confidence															.	.	.	.						.	.	.	.	.
Template Conservation															.	.	.	.						.	.	.	.	.
Template Sequence		S	D	Y	I	V	V	G	R	P	I	Y	K	N	.	.	.	.	E	N	P	R	A	.	.	.	.	.	V	C	E	K	I	L	N	K
Template Known Secondary structure			S										T	S	.	.	.	.	S					.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.						.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.						.	.	220	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions