Job Description P32141 Confidence 52.20% Date Thu Jan 5 11:49:28 GMT 2012 Rank 416 Aligned Residues 239 % Identity 11% Template c3r89A_ PDB info PDB header:lyase Chain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of orotidine 5-phosphate decarboxylase from2 anaerococcus prevotii dsm 20548 Resolution 1.84 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.
Query Sequence		A	M	L	A	V	D	Q	R	E	A	M	R	M	M	F	A	A	A	G	A	P	A	P	V	A	D	S	V	L	T	D	F	K	V	N	A	A	K	A	L	S	P	Y	A	S	A	I	L	V	D	.	.	.	.	.	.	.	.	.	Q	Q	F	C	Y	R	Q	V	V	E	Q	N	A	I	A	K	S	C	A	M	I
Query Conservation																																																				.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																																										.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.
Template Sequence		V	C	I	G	L	D	.	.	.	S	S	I	D	Y	I	P	E	N	X	K	A	G	K	S	V	S	E	A	L	F	S	Y	N	K	E	I	I	D	Q	T	Y	D	V	C	A	I	Y	K	L	Q	I	A	Y	Y	E	S	Y	G	I	E	G	X	I	A	Y	R	D	T	L	S	Y	L	R	E	K	D	L	L	S	I
Template Known Secondary structure								.	.	.			G	G	G	S						T	T																			T	T	S		S											T	T																		T	T
Template Predicted Secondary structure								.	.	.
Template SS confidence
		17	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																										.	.					.	.
Query SS confidence																										.	.					.	.
Query Sequence		V	A	A	D	E	F	I	P	G	N	G	I	P	V	D	S	V	V	I	D	R	K	I	N	.	.	P	L	Q	I	.	.	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R
Query Conservation																										.	.					.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.											.	.					.	.																		.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Sequence		G	D	V	.	.	.	.	.	.	.	.	.	.	.	K	R	S	D	I	A	A	S	A	K	X	Y	A	K	A	H	F	E	G	D	F	E	T	D	F	I	T	L	N	P	Y	X	G	X	D	.	.	.	.	.	.	.	.	S	I	E	P	Y	E	E	Y	I	E	K	G	D	K	G	V	F	V	L	L	R	T	S
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.																		S	G	G	G			S							T	T		G	G	.	.	.	.	.	.	.	.	G	T	G	G	G						T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.												.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.								.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.
Predicted Secondary structure													.	.	.	.	.	.	.														.	.	.	.	.	.	.																																									.
Query SS confidence													.	.	.	.	.	.	.														.	.	.	.	.	.	.																																									.
Query Sequence		P	P	R	R	G	D	K	F	D	R	E	.	.	.	.	.	.	.	Q	A	I	I	D	A	A	K	E	L	G	D	S	.	.	.	.	.	.	.	G	A	D	L	Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I	L	S	S	.	G
Query Conservation													.	.	.	.	.	.	.														.	.	.	.	.	.	.																																									.
Alig confidence													.	.	.	.	.	.	.														.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																			.	.	.	.	.	.	.	.	.
Template Sequence		N	P	G	A	K	D	F	E	V	L	P	V	D	G	E	E	F	F	Y	K	V	G	D	K	X	R	E	L	N	E	K	Y	I	G	K	S	G	F	G	P	I	G	L	V	V	G	A	T	H	.	.	.	.	.	.	.	.	.	S	E	E	V	E	K	I	R	K	R	Y	D	K	X	F	F	L	I	P	G	F	G
Template Known Secondary structure		S	G	G	G	G	T	T	T	T				T	T			T													G	G	G			T	T	S													.	.	.	.	.	.	.	.	.											T	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.										.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	E	K	L	F	P	R	A	V	R	V	A	M	T	A	G	A	S	G	F	L	A	G	R	A	V	W	A	S	V	V	G	L	P	D	N	E	L	M	L	R	D	V	C	A	P	K	L	Q	Q	L	G	D	I	V	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	K	A	D	S	X	N	V	Y	K	L	L	E	G	L	N	G	G	V	V	N	S	S	R	A	I	L	K	N	W	Q	N	Y	E	D	G	S	E	K	V	G	Y	Y	A	R	K	K	A	I	E	T	Y	E	E	I	K	A
Template Known Secondary structure		S	S									T	T		B	T	T	B	S											T	G	G	G	G	S	T	T	G	G	G																			T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions