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Job DescriptionP32141
Confidence98.23%DateThu Jan 5 11:49:28 GMT 2012
Rank30Aligned Residues196
% Identity11%Templatec3ngjC_
PDB info PDB header:lyaseChain: C: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 entamoeba histolytica
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
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Query Sequence  ADSVLTDFKVNAAKALSPYASAILVDQQFCYRQVVEQNAIAKSCAMIVAADEFIPGNGIPVDSVVIDRKINPLQIKQDGG
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Template Sequence  ADATEEQIRKLCSEAAEYKFASVCVNPTWVPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYE. . . . . . . . TKVAVEQGA
Template Known Secondary structure  TT

T
S
GGGTTTSS
STTT

S
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   17..20.........30.........40.........50.........60.........70......... 80........
 
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Query Sequence  KALKLLVLWR. . SDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDAAKELGDSGADLYKVEMPL
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Template Sequence  EEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIEC. . . . . . . . . CYLTNEEKVEVCKRCVAAGAEYVKTS. TG
Template Known Secondary structure  S

TT
TTS

G.........GGS
T
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   8990.........100.........110.........120.........130 .........140.........150...... ..
 
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Query Sequence  YGKGPQQELLCASQRLNDHINMPWVILSSGVDEKLFPRAVRVAMTAGA. . SGFLAGRAVWAS
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Template Sequence  FGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMIN. . . . NGASRIGASAGIAILNG
Template Known Secondary structure  SSS



TTSSSS

S....TTS
T
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   159160.........170.........180.........190......... 200.........210......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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