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Job DescriptionP32141
Confidence97.92%DateThu Jan 5 11:49:28 GMT 2012
Rank49Aligned Residues195
% Identity13%Templatec3ng3A_
PDB info PDB header:lyaseChain: A: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of deoxyribose phosphate aldolase from mycobacterium2 avium 104 in a schiff base with an unknown aldehyde
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
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Query Sequence  ADSVLTDFKVNAAKALSPYASAILVDQQFCYRQVVEQNAIAKSCAMIVAADEFIPGNGIPVDSVVIDRKINPLQIKQDGG
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Template Sequence  PEATAADVAALVTEAAELGVYAVCVSPPMVPAAVQ. . . . AGARVASVAGFPSGKHVSAVKAHE. . . . . . . . AALAVASGA
Template Known Secondary structure  TT

T
S
GGG....T


STTT

S
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   1920.........30.........40.........50... ......60.........70....... ..80......
 
   121........130 .........140.........150.........160.........170.........180.........190........
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Query Sequence  KALKLLVLWR. . SDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDAAKELGDSGADLYKVEMPL
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Template Sequence  AEIDMVIDVGAALAGDLDGVRADIAAVRGAVGGAVLKVIVESSALL. . . . . ALADEHTLVRVCRAAEDAGADFVKTS. TG
Template Known Secondary structure  S

TT
TTS

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   8990.........100.........110.........120.........130.... .....140.........150.........160 ..
 
   199200 .........210.........220.........230.........240...... ...250........
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Query Sequence  YG. . KGPQQELLCASQRLNDHINMPWVILSSGVDEKLFPRAVRVAMTAGA. . SGFLAGRAVWAS
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Template Sequence  FHPSGGASVRAVALMAEAVGG. RLGVKASGGIRTAADALAMLD. . . . AGATRLGLSGTRAVLDG
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TT
S

TT.SSSS

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   163......170.........180... ......190.........200.... .....210.........220.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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