Job Description P32141 Confidence 96.41% Date Thu Jan 5 11:49:28 GMT 2012 Rank 130 Aligned Residues 140 % Identity 19% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L
Query Conservation
Alig confidence																.	.	.	.	.							.	.	.	.																						.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																.	.	.	.	.							.	.	.	.																						.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	.	.	.	.	.	A	D	V	P	T	N	.	.	.	.	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	I	A	P	.	.	.	.	.	.	.	.	P	T	A	S	D	E	T	L	R	A	V	A	Q	L	G	K	G	Y	.	.	.	T
Template Known Secondary structure									T							.	.	.	.	.	T	T	S		G	G	.	.	.	.	G											T	T									.	.	.	.	.	.	.	.	T	T			S												S		.	.	.
Template Predicted Secondary structure																.	.	.	.	.							.	.	.	.																						.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.									.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I	L	S	S	G	.	V	D	E	K	L	F	P	R	A	V	R	V	A	M	T	A	G	A	S	G	F	L	A	G	R	A	V	W	A	S	V	V	G	L	P	D	N	E	L	M	L	R
Query Conservation																																							.
Alig confidence									.	.	.	.	.	.	.	.																.							.							.	.	.	.																														.	.	.
Template Conservation									.	.	.	.	.	.	.	.																.														.	.	.	.																														.	.	.
Template Sequence		Y	L	L	S	R	A	P	.	.	.	.	.	.	.	.	V	H	A	L	L	E	R	L	Q	Q	F	D	A	P	P	.	A	L	L	G	F	G	I	S	E	P	A	Q	V	.	.	.	.	K	Q	A	I	E	A	G	A	A	G	A	I	S	G	S	A	V	V	K	I	I	E	T	H	L	D	N	P	A	.	.	.
Template Known Secondary structure									.	.	.	.	.	.	.	.											T	T				.					S	S			S					.	.	.	.						T	T		S					S	S									T	T	T				.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.																.														.	.	.	.																														.	.	.
Template SS confidence
		175	.	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	C	A	P	K	L	Q	Q	L	G	D	I	V	D	E	M	M
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	K	Q	L	T	E	L	A	N	F	T	Q	A	M	K	K	A	T
Template Known Secondary structure		.																T	T
Template Predicted Secondary structure		.
Template SS confidence
			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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