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Job DescriptionP32141
Confidence60.56%DateThu Jan 5 11:49:28 GMT 2012
Rank391Aligned Residues142
% Identity11%Templatec3mkcA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:racemase; PDBTitle: crystal structure of a putative racemase
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160.........170.........180.........190.
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Query Sequence  PLQIKQDGGKALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDAAKELGDSGADL
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Template Sequence  LEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGI. LGHDTDXXVDYLY. . . . . . . RFTDWYEVARLLNSIEDLELYF
Template Known Secondary structure  TT
S

TT



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TGGG

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   165....170.........180.........190.........200. ........210.... .....220.........230......
 
   192.......200.........210.........220.........230.........240.........250.........260.........270.
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Query Sequence  YKVEMPLYGKGPQQELLCASQRLNDHINMPWVILSSGVDEKLFPRAVRVAMTAGASGFLAGRAVWASVVGLPDNELMLRD
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Template Sequence  AEATLQHD. . . . . . . DLSGHAKLVENTRSR. ICGAEXSTT. . . RFEAEEWITKGKVHLLQSDYNRCG. . . . . . . . . . . . .
Template Known Secondary structure  S
S
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.B
TT

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TTTTT.............
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   237..240.... .....250......... 260........ .270.........280.........290..
 
   272.......280......
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Query Sequence  VCAPKLQQLGDIVDE
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Template Sequence  . GLTELRRITEXATA
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   293......300......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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