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Job DescriptionP32141
Confidence45.73%DateThu Jan 5 11:49:28 GMT 2012
Rank441Aligned Residues241
% Identity13%Templatec3l52A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of putative orotidine 5'-phosphate2 decarboxylase from streptomyces avermitilis ma-4680
Resolution1.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60...... ...70.....
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Query Sequence  TINDITRASGGFAMLAVDQREAMRMMFAAAGAPAPVADSVLTDFKVNAAKALSPYASAILVD. . . . . . . . . QQFCYRQVV
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Template Sequence  RLSRAXDDRGPLC. VGIDPHASLLADWG. . . . . LSDDVAGLERFSRTVVEALGEHVAVFKPQSAFFERFGSRGVAVLEKT
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SSTTT
SBTT
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Query Sequence  EQNAIAKSCAMIVAADEFIPGNGIPVDSVVIDRKINPLQIKQ. . . . . . . . DGGKALKLLVLWRSDEDAQQRLDMVKEFNE
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Template Sequence  VAEARAAGALVVXDA. . . . . . . . . . . KRGDIG. . STXAAYAEAFLRKDSPLFSDALTVSPYLGYG. . . . . . . . SLRPAVE
Template Known Secondary structure  TT
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..SSTTSTT

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   83......90....... ..100... ......110.........120.........130.... .....140.
 
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Query Sequence  LCHSHGLVSIIEPVVRPPRRGDKFDRE. . . . . . . . QAIIDAAKELG. . DSGADLYKVEMPLYGKGPQQELLCASQRLNDH
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Template Sequence  LARESGAGLFVLALTSNPEGGEVQHAVRTDGRDVAATXLAHLAAENAGEEPLGSFGAVVGA. . . . . . . . TLGDLSSYDLD
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STTTT
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BTTT
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   142.......150.........160.........170.........180.........190.........200.. .......210...
 
   218.220.........230.........240........ .250.........260.........270.........280....
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Query Sequence  INMPWVILSSGVDEKLFPRAVRVAMTAGASG. FLAGRAVWASVVGLPDNELMLRDVCAPKLQQLGDIV
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Template Sequence  INGPLLAPGIGAQGAAPADLPGVFGAAVRNVVPNVSRGVLRH. . . . GPDVRALRTAADRFAEEIRAAV
Template Known Secondary structure  SSS


TTSTT
SGGGGGGGGGSTT....TT
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   214.....220.........230.........240.........250..... ....260.........270.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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