Job Description P32141 Confidence 53.46% Date Thu Jan 5 11:49:28 GMT 2012 Rank 412 Aligned Residues 175 % Identity 17% Template c3l2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2. Resolution 1.85 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.										.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.
Query Sequence		P	V	A	D	S	V	L	T	D	F	K	V	N	A	A	K	A	L	S	P	Y	A	S	A	I	L	V	.	.	.	.	.	.	.	.	.	D	Q	Q	F	C	Y	R	Q	V	V	E	Q	N	A	I	A	K	S	C	A	M	I	V	A	A	D	E	F	I	P	G	N	G	I	P	V	D	S	V	V	I	D	R	K
Query Conservation																													.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																																															.	.
Template Sequence		S	L	M	G	K	T	I	T	D	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	F	A	N	V	T	T	A	E	S	V	L	E	A	A	G	A	I	R	E	I	I	T	D	K	P	L	L	F	T	F	.	.	R	S	A	K	E	G	G	E	Q	A	L	T	T	G	Q	Y	I
Template Known Secondary structure						S	S												T	T	S			S						G	G	G		T	T	T	T																		S	S							.	.			G	G	G	T		S	S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		I	N	P	L	Q	I	K	Q	D	G	.	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G
Query Conservation												.
Alig confidence												.													.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Sequence		D	L	N	R	A	A	V	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	.	.	.	.	.	.	.	.	D	E	V	K	A	T	V	G	Y	A	H	Q	H	N	V	A	V	I	M	S	N	H	D	F	.	.	.	.	.	H	K	T	P	A	A	E	E	I	V	Q	R	L	R	K	M	Q	E	L	G
Template Known Secondary structure											S			S						G	G	G			.	.	.	.	.	.	.	.													T	T										S	.	.	.	.	.	S																		T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																									.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.									.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		A	D	L	Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	.	M	P	W	V	I	L	S	S	G
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		A	D	I	P	K	I	A	V	M	P	Q	T	K	A	D	V	L	T	L	L	T	A	T	V	E	M	Q	E	R	Y	A	D	R	P	I	I	T	M	S	M	S
Template Known Secondary structure			S									S	S																		T		S	S								T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions