Job Description P32141 Confidence 49.83% Date Thu Jan 5 11:49:28 GMT 2012 Rank 423 Aligned Residues 95 % Identity 16% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L	Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.																							.					.	.	.	.	.	.	.															.
Template Conservation																								.	.	.	.	.	.	.	.	.																							.					.	.	.	.	.	.	.															.
Template Sequence		G	N	A	I	M	K	A	K	Q	H	K	M	L	A	I	Q	R	L	F	M	I	D	.	.	.	.	.	.	.	.	.	S	S	A	Y	N	K	G	V	A	L	I	Q	K	V	Q	P	D	C	I	E	L	L	.	P	G	I	I	.	.	.	.	.	.	.	P	E	Q	V	Q	K	M	T	Q	K	L	H	I	P	.
Template Known Secondary structure											T	T											S	.	.	.	.	.	.	.	.	.																	S						.		T	T		.	.	.	.	.	.	.															.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																							.					.	.	.	.	.	.	.															.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		V	I	L	S	S	G	V	D	E	K	L	F	P	R	A	V	R	V	A	M	T	A	G	A	S	G	F	L	A	G	.	R	A	V	W	A	S
Query Conservation																																.
Alig confidence															.	.	.															.
Template Conservation															.	.	.
Template Sequence		V	I	A	G	G	L	I	E	T	S	E	Q	V	.	.	.	N	Q	V	I	A	S	G	A	I	A	V	T	T	S	N	K	H	L	W	E	G
Template Known Secondary structure						S	S			S					.	.	.					T	T	T									G	G	G	G	T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions