Job Description P32141 Confidence 97.63% Date Thu Jan 5 11:49:28 GMT 2012 Rank 64 Aligned Residues 200 % Identity 15% Template c3jr2D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:hexulose-6-phosphate synthase sgbh; PDBTitle: x-ray crystal structure of the mg-bound 3-keto-l-gulonate-6-phosphate2 decarboxylase from vibrio cholerae o1 biovar el tor str. n16961 Resolution 1.80 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		A	M	L	A	V	D	Q	R	E	A	M	R	M	M	F	A	A	A	G	A	P	A	P	V	A	D	S	V	L	T	D	F	K	V	N	A	A	K	A	L	S	P	Y	A	S	A	I	L	V	D	.	.	.	.	Q	Q	F	C	Y	R	Q	V	V	E	Q	N	A	I	A	K	S	C	A	M	I	V	A	A	D	E
Query Conservation																																																				.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.												.	.	.	.																									.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																																								.	.
Template Sequence		I	Q	I	A	L	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	L	T	D	A	V	A	V	A	S	N	.	V	A	S	Y	V	D	V	I	E	V	G	T	I	L	A	F	A	E	G	X	K	A	V	S	T	L	R	H	N	H	P	N	H	I	L	V	C	D	X	.	.
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S											.		G	G	G		S													T	T											T	T	S							.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																																								.	.
Template SS confidence
		6	.	.	.	10	.	.																				.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	P	G	N	G	I	P	V	D	S	V	V	I	D	R	K	I	N	P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.										.																					.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.										.																					.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	K	T	T	D	G	G	A	I	L	.	S	R	X	A	F	E	A	G	A	D	W	I	T	V	S	A	A	A	H	I	.	.	.	.	.	.	.	.	A	T	I	A	A	C	K	K	V	A	D	E	L	N	G	E	I	Q	I	E	I	Y	G	N	W	T	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.				S						.								T		S						T	T	S			.	.	.	.	.	.	.	.													T	T									S	S			.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.										.																					.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template SS confidence
											64	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L	Y	K	V	E	M	P	.	.	.	.	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I	L	S	S	G	V	D	E	K	L	F	P	R	A	V	R	V	A	M	T	A	G	A	S	G
Query Conservation																											.	.	.	.
Alig confidence		.	.	.	.	.																					.	.	.	.																								.	.											.	.	.	.
Template Conservation		.	.	.	.	.																																																.	.											.	.	.	.
Template Sequence		.	.	.	.	.	X	Q	D	A	K	A	W	V	D	L	G	I	T	Q	A	I	Y	H	R	S	R	D	A	E	L	A	G	I	G	W	T	T	D	D	L	D	K	X	R	Q	L	S	A	L	G	I	E	.	.	L	S	I	T	G	G	I	V	P	E	.	.	.	.	D	I	Y	L	F	E	G	I	K	T	K	T
Template Known Secondary structure		.	.	.	.	.										T	T																T			S															T			.	.					S	S			G	G	.	.	.	.	G	G	G	G	G	T	T	S
Template Predicted Secondary structure		.	.	.	.	.																																																.	.											.	.	.	.
Template SS confidence
							119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	A	G	R	A	V	W	A	S	V	V	G	L	P	D	N	E	L	M	L	R	D	V	C	A	P	K	L	Q	Q	L
Query Conservation
Alig confidence												.	.	.	.									.	.
Template Conservation												.	.	.	.									.	.
Template Sequence		F	I	A	G	R	A	L	A	G	A	.	.	.	.	E	G	Q	Q	T	A	A	A	.	.	L	R	E	Q	I	D	R	F
Template Known Secondary structure					S	G	G	G	S	S	T	.	.	.	.	T								.	.
Template Predicted Secondary structure												.	.	.	.									.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions