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Job DescriptionP32141
Confidence87.19%DateThu Jan 5 11:49:28 GMT 2012
Rank271Aligned Residues172
% Identity12%Templatec3ivuB_
PDB info PDB header:transferaseChain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og
Resolution2.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130. ........140.........150.........160.........170.........180......
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Query Sequence  PLQIKQDGGKALKLLVLWRS. . . . . DEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDAAKELGD
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Template Sequence  ARVAVETGVDGVDVVIGTSQYLRKYSHDMTYIIDSATEVINFVKSKGIEVRF. . . . . SSEDSFRSD. LVDLLSLYKAVDK
Template Known Secondary structure  TT
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   111........120.........130.........140.........150.........160.. .......170. ........180....
 
   187..190.........200.........210.........220.........230.........240.........250.........260......
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Query Sequence  SGADLYKVEMPLYGKGPQQELLCASQRLNDHINMPWVILSSGVDEKLFPRAVRVAMTAGASGFLAGRAVWASVVGLPDNE
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Template Sequence  IGVNRVGIADTV. GCATPRQVYDLIRTLRGVVSCD. IECHFHNDTGMAIANAYCALEAGATHIDTSILGIGERNGITPLG
Template Known Secondary structure 

SSS.S



SS.B
TTS
T

BGGG
SSTT
B
B
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   187..190........ .200.........210.........220 .........230.........240.........250.........260....
 
   267.. 270.........280.........290.
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Query Sequence  LML. . . . . . . . . . . . RDVCAPKLQQLGDIVDEMMAKR
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Template Sequence  ALLARMYVTDREYITHKYKLNQLRELENLVADAVEVQ
Template Known Secondary structure 
S
GGGT

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   265....270.........280.........290.........300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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