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Job DescriptionP32141
Confidence98.12%DateThu Jan 5 11:49:28 GMT 2012
Rank35Aligned Residues189
% Identity14%Templatec3inpA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60...... ...70.........80.........90.........100.........110....
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Query Sequence  VLTDFKVNAAKALSPYASAILVD. . . . . . . . . QQFCYRQVVEQNAIAKSCAMIVAADEFIPGNGIPVDSVVIDRKINPLQ
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Template Sequence  DLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDAL. . . . . . . . . . . . . IES
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GGGTT


BSSSSS
B


T

S

SS
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   14.....20.........30.........40.........50.........60.........70....... ..80
 
   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  IKQDGGKALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDAAKELGDSGADLYKV
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Template Sequence  FAKAGATSIVFHPEASEH. . . . . . . . . IDRSLQLIKSFGIQAGLALNPATGIDCLKYV. . . . . . . . . . . . . ESNIDRVLI
Template Known Secondary structure  T
S
GGG
S
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TT

SGGGTTT.............GGG
S
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   81........90........ .100.........110.........120......... 130........
 
   195 ....200.........210.........220.........230.........240.........250.........260.........
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Query Sequence  E. . . . . MPLYGKGPQQELLCASQRLNDHINMPWVILSSGVDEKLFPRAVRVAMTAGASGFLAGRAVWASVVGLPDNELML
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Template Sequence  MSVNPGFQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNI. . . . AEIAVCGVNAFVAGSAIFNS. . . . DSYKQ. .
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S
TT




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   139140.........150.........160.........170.........180... ......190.........200... .....
 
   270.........280
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Query Sequence  RDVCAPKLQQL
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Template Sequence  . . . TIDKMRDE
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   211.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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