 |
Job Description | P32141 | Confidence | 78.19% | Date | Thu Jan 5 11:49:28 GMT 2012 |
Rank | 325 | Aligned Residues | 75 |
% Identity | 19% | Template | c3gyeA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:dihydroorotate dehydrogenase, putative; |
PDBTitle: didydroorotate dehydrogenase from leishmania major
|
Resolution | 2.00 Å |
|
 |
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | G | K | G | P | Q | Q | E | L | L | C | A | S | Q | R | L | N | D | H | I | . |
N | M | P | W | V | I | L | S | S | G | V | D | E | K | L | F | P | R | A | V | R | V | A | M | T | A | G | A | S | G | F | L | A | G | R | A | V | W | A | S | V | V | G | L | P | D | N | E | L | M | L | R | D | V | C | A | P | K | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |
|
|   |
|
|
|
|
|
|   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|
|
|   |   |
|   |
|
|   |
|   |
|
| . | . | . | . |   |
|
|
|
|
|   |
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
Template Sequence |   |
G | G | R | Y | V | L | P | T | A | L | A | N | I | N | A | F | Y | R | R | C | P | G | K | L | I | F | G | C | G | G | V | Y | T | G | E | D | A | F | L | H | V | L | . |
. |
. |
. |
A | G | A | S | M | V | Q | V | G | T | A | L | Q | E | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | P | S | I | F |
Template Known Secondary structure |   |
 | G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | . | . | . | . |  | T |  |  |  |  |  |  |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| T | T |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |  |
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | |
|
|
|
. | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 280 | . | . | . |
  |
  |   |
278 | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | L | G | D | I | V | D | E | M | M | A | K | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |   |
|   |   |   |
Template Sequence |   |
E | R | L | T | S | E | L | L | G | V | M | A | K | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
284 | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|